Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00223 ATGCCTTCTTCTCTTCAGTTGGATAGGTTCAATCCTATCACCGACGCCGTCACCACCGCCACCGTCGCCATCGCCAACGGCGTTAACTGCCCGAAGCAGCCTCAAGCGCCGCCGTCCACTGCGGCGCGTCGCCTAATGGTGCCCTCTCTCTCTTCTGGCAGGGGAATCGCGGCCTCCGACACGGTGGCGCTCCACCACGCGAACGTGGTTGGGCTCAACCAGTGCTGCTCCGTGGTGACGCAGCACATCAACGCCCCCGTCGCAGCCGTGTGGGCGGTGGTGCGGCGGTTCGACAACCCACAGGGGTACAAGAACTTCGTGAAGAGCTGCCACGTCATCACCGGCCACGGCATTCGCGTGGGCGCCGTCCGCGAGGTGCGGGTGGTGTCGGGGCTCCCCGCCGAGATGAGCACGGAGCGGCTGGAGATCCTCGATGACGAGCGCCATGTCATCAGTTTCAGCGTCGTCGGCGGCGACCACCGCCTCAGGAACTACCGGTCGGTGACGACGCTCCACGCCAACGGGAACGGGACACTTGTCATCGAGTCATACGTCGTTGACGCACCACAGGGTAACACTAAGGAGGAAACATGCGTGTTCGTCGACACGATCGTACGTTGTAACTTGCAGTCGCTGGCTCAGATTGCTGAGAACAGAACCAAAAACTGTGAAAACACTGCACAACACTGTTAA 693 0.6147 MPSSLQLDRFNPITDAVTTATVAIANGVNCPKQPQAPPSTAARRLMVPSLSSGRGIAASDTVALHHANVVGLNQCCSVVTQHINAPVAAVWAVVRRFDNPQGYKNFVKSCHVITGHGIRVGAVREVRVVSGLPAEMSTERLEILDDERHVISFSVVGGDHRLRNYRSVTTLHANGNGTLVIESYVVDAPQGNTKEETCVFVDTIVRCNLQSLAQIAENRTKNCENTAQHC 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00223 230 Pfam Polyketide cyclase / dehydrase and lipid transport 75 217 IPR019587 -
Gma18g00223 230 PANTHER - 36 229 - -
Gma18g00223 230 Gene3D - 39 230 IPR023393 -
Gma18g00223 230 PANTHER POLYKETIDE CYCLASE/DEHYDRASE AND LIPID TRANSPORTER 36 229 - -
Gma18g00223 230 CDD PYR_PYL_RCAR_like 95 217 - -
Gma18g00223 230 SUPERFAMILY Bet v1-like 74 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00223 Gma-Chr18 1789757 1791226 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00223 K14496 - gmx:121174020 442.965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00223 18 1789757 1791226 Gma11g02353 11 38936832 38938018 ECH
Gma01g01273 01 45134300 45135403 Gma18g00223 18 1789757 1791226 ECH
Gma07g01443 07 19480337 19481332 Gma18g00223 18 1789757 1791226 ECH
Gma18g00223 18 1789757 1791226 Gma18g00223 18 1789757 1791226 ECH
Gma18g00223 18 1789757 1791226 Gma11g02353 11 38936832 38938018 GST
Gma18g00223 18 1789757 1791226 Gma14g00475 14 4488635 4489850 PCT
Gma14g00475 14 4488635 4489850 Gma18g00223 18 1789757 1791226 PCT