Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gma01g01273 | ATGCTACAAAATTCCTCCATGTCTTCCCTCCTCCTCCACCGGATCAACGGTGGCGGTGGTGCAACCACGGCCACCAACTGTCACGACACCGTCTTTATGACGGTGCCGGATGGCGTAGCGCGCTACCACACCCACGCGGTAGCGCCGAACCAGTGCTGCTCCTCGGTAGCGCAGGAGATCGGGGCCTCGGTCGCCACCGTGTGGTCAGTGTTGCGCCGCTTCGACAACCCGCAGGCCTACAAGCACTTCGTGAAGAGCTGCCATGTCATCGGCGGGGACGGCGACGTCGGCACGCTCCGGGAGGTTCACGTCATCTCCGGCCTGCCCGCTGCCAGGAGCACCGAGCGCCTCGAGATCCTCGACGACGAGCGCCACGTCATCAGCTTCAGCGTCGTGGGCGGGGACCACCGCCTCGCCAACTACCGCTCCGTCACCACCCTCCACCCCACCGCTTCCTCCGCCTCCGGAGGATGCTCCGGCACGGTGGTCGTGGAGTCCTACGTGGTGGACGTGCCTCCCGGGAACACGCGCGAAGACACGCGCGTGTTCGTCGACACTATCGTGAAGTGCAACCTTCAGTCGCTCGCGCAAACCGCAGAGAACTTAACGCTGCGAAAGAACAACAACAACGATTACAAGTGCTGTTCTTAA | 651 | 0.6329 | MLQNSSMSSLLLHRINGGGGATTATNCHDTVFMTVPDGVARYHTHAVAPNQCCSSVAQEIGASVATVWSVLRRFDNPQAYKHFVKSCHVIGGDGDVGTLREVHVISGLPAARSTERLEILDDERHVISFSVVGGDHRLANYRSVTTLHPTASSASGGCSGTVVVESYVVDVPPGNTREDTRVFVDTIVKCNLQSLAQTAENLTLRKNNNNDYKCCS | 216 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gma01g01273 | 216 | PANTHER | ABSCISIC ACID RECEPTOR PYL4-LIKE | 24 | 207 | - | - | |
| Gma01g01273 | 216 | Pfam | Polyketide cyclase / dehydrase and lipid transport | 52 | 200 | IPR019587 | - | |
| Gma01g01273 | 216 | PANTHER | - | 24 | 207 | - | - | |
| Gma01g01273 | 216 | Gene3D | - | 20 | 213 | IPR023393 | - | |
| Gma01g01273 | 216 | CDD | PYR_PYL_RCAR_like | 52 | 200 | - | - | |
| Gma01g01273 | 216 | SUPERFAMILY | Bet v1-like | 51 | 198 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Gma01g01273 | Gma-Chr1 | 45134300 | 45135403 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Gma01g01273 | K14496 | - | gmx:100788199 | 421.394 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Gma01g01273 | 01 | 45134300 | 45135403 | Gma18g00223 | 18 | 1789757 | 1791226 | ECH | |
| Gma01g01273 | 01 | 45134300 | 45135403 | Gma11g02353 | 11 | 38936832 | 38938018 | ECH | |
| Gma01g01273 | 01 | 45134300 | 45135403 | Gma02g02468 | 02 | 50736156 | 50737395 | ECH | |
| Gma01g01273 | 01 | 45134300 | 45135403 | Gma14g00475 | 14 | 4488635 | 4489850 | ECH | |
| Gma01g01273 | 01 | 45134300 | 45135403 | Gma01g01273 | 01 | 45134300 | 45135403 | ECH |