Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00208 ATGGCCGATCAGTTATCGAAGGGAGAGGAATTCGAGAAAAAGGCTGAGAAGAAGCTCAGCGGTTGGGGCTTGTTTGGCTCCAAGTATGAAGATGCCGCCGATCTCTTCGATAAAGCCGCCAATTGCTTCAAGCTCGCCAAATCATGGGACAAGGCTGGAGCGACATACCTGAAGTTGGCAAGTTGTCATTTGAAGTTGGAAAGCAAGCATGAAGCTGCACAGGCCCATGTCGATGCTGCACATTGCTACAAAAAGACTAATATAAACGAGTCTGTATCTTGCTTAGACCGAGCTGTAAATCTTTTCTGTGACATTGGAAGACTCTCTATGGCTGCTAGATATTTAAAGGAAATTGCTGAATTGTACGAGGGTGAACAGAATATTGAGCAGGCTCTTGTTTACTATGAAAAATCAGCTGATTTTTTTCAAAATGAAGAAGTGACAACTTCTGCGAACCAATGCAAACAAAAAGTTGCCCAGTTTGCTGCTCAGCTAGAACAATATCAGAAGTCGATTGACATTTATGAAGAGATAGCTCGCCAATCCCTCAACAATAATTTGCTGAAGTATGGAGTTAAAGGACACCTTCTTAATGCTGGCATCTGCCAACTCTGTAAAGAGGACGTTGTTGCTATAACCAATGCATTAGAACGATATCAGGAACTGGATCCAACATTTTCAGGAACACGTGAATATAGATTGTTGGCGGACATTGCTGCTGCAATTGATGAAGAAGATGTTGCAAAGTTTACTGATGTTGTCAAGGAATTTGATAGTATGACCCCTCTGGATTCTTGGAAGACCACACTTCTCTTAAGGGTGAAGGAAAAGCTGAAAGCCAAAGAACTTGAGGAGGATGATCTTACTTGA 870 0.4218 MADQLSKGEEFEKKAEKKLSGWGLFGSKYEDAADLFDKAANCFKLAKSWDKAGATYLKLASCHLKLESKHEAAQAHVDAAHCYKKTNINESVSCLDRAVNLFCDIGRLSMAARYLKEIAELYEGEQNIEQALVYYEKSADFFQNEEVTTSANQCKQKVAQFAAQLEQYQKSIDIYEEIARQSLNNNLLKYGVKGHLLNAGICQLCKEDVVAITNALERYQELDPTFSGTREYRLLADIAAAIDEEDVAKFTDVVKEFDSMTPLDSWKTTLLLRVKEKLKAKELEEDDLT 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00208 289 CDD SNAP 20 278 IPR000744 GO:0006886
Gma18g00208 289 SUPERFAMILY TPR-like 6 280 IPR011990 GO:0005515
Gma18g00208 289 PANTHER SOLUBLE NSF ATTACHMENT PROTEIN SNAP 1 289 IPR000744 GO:0006886
Gma18g00208 289 Pfam Soluble NSF attachment protein, SNAP 7 278 - -
Gma18g00208 289 Coils Coil 151 185 - -
Gma18g00208 289 Gene3D Tetratricopeptide repeat domain 5 288 IPR011990 GO:0005515
Gma18g00208 289 PANTHER ALPHA-SOLUBLE NSF ATTACHMENT PROTEIN 1 289 - -
Gma18g00208 289 PRINTS NSF attachment protein signature 28 47 IPR000744 GO:0006886
Gma18g00208 289 PRINTS NSF attachment protein signature 91 108 IPR000744 GO:0006886
Gma18g00208 289 PRINTS NSF attachment protein signature 152 175 IPR000744 GO:0006886
Gma18g00208 289 PRINTS NSF attachment protein signature 183 202 IPR000744 GO:0006886
Gma18g00208 289 PRINTS NSF attachment protein signature 224 244 IPR000744 GO:0006886
Gma18g00208 289 PRINTS NSF attachment protein signature 255 275 IPR000744 GO:0006886
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00208 Gma-Chr18 1669969 1674606 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00208 K15296 - gmx:100814639 521.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00208 18 1669969 1674606 Gma11g02367 11 39057425 39062247 ECH
Gma18g00208 18 1669969 1674606 Gma18g00208 18 1669969 1674606 ECH
Gma18g00208 18 1669969 1674606 Gma11g02367 11 39057425 39062247 GST
Gma18g00208 18 1669969 1674606 Gma14g00459 14 4371990 4375556 PCT
Gma14g00459 14 4371990 4375556 Gma18g00208 18 1669969 1674606 PCT