LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma14g00459	ATGGGTGATCATTTGGCGAGGGCCGAGGATTTTGAGAACAAGGCAGAGAAGAAGCTCAGCGGTTGGGGCTTGTTTGGCTCCAAATTCGAGGACGCTGCTGATCTTTTCGACAAATCCGCCAATTCTTATAAGCTCGCTAAATCATGGGACAAAGCAGGATCCACCTACATCAAATTAGCGAATTGCAATTTAAAGTTGGAAAGCAAGCATGAAGCTGCACAAGCTTATGTTGACGCTGCGCATTGCTATAAAAAAACTAATATAAATGAGTCTGTATCTTGCTTAGACAATGCTGTAAATATCTTCTGTGAGATTGGAAGACTCTCTATGGCTGCTAGATATTTGAAGGAAATTGCTGAGTTGTATGAGTCTGAACAGAATATCGAGCAGGCCGTTGTTTACTATGAAAAATCAGCTGATTTTTATGAAAATGAAGAAGTGAACACTTCTGCAAACCAGTGCAAGCAAAAAGTTGCTCAATTCTCTGCCCAGCTAGAACAATACCAGAGGTCAATTGAGATTTATGAAGATATTGCTCGCCAGTCTCTCAGCAATAATTTGCTGAAGTATGGGGTTAAAGGACATCTTCTTAATGCTGGCATTTGCCAACTTTGTAAAGATGATGTTATTGCTATTACCAATGCATTGGAGCGATATCAGGACTTGGATCCAACATTTTCTGGAACACGTGAATATAGACTTCTGGCAGATATTGCTGCTGCAATTGATGAAGAAGATGTTGGAAAGTTTACTGAAGTTATCAAGGAATTTGATAGCATGACCCCTTTGGATTCTTGGAAGACAACACTTCTTTTGAGGGTGAAGGAAAAACTGAAAGCCAAAGAACTTGAGGAGGATGATCTTACTTGA	870	0.4011	MGDHLARAEDFENKAEKKLSGWGLFGSKFEDAADLFDKSANSYKLAKSWDKAGSTYIKLANCNLKLESKHEAAQAYVDAAHCYKKTNINESVSCLDNAVNIFCEIGRLSMAARYLKEIAELYESEQNIEQAVVYYEKSADFYENEEVNTSANQCKQKVAQFSAQLEQYQRSIEIYEDIARQSLSNNLLKYGVKGHLLNAGICQLCKDDVIAITNALERYQDLDPTFSGTREYRLLADIAAAIDEEDVGKFTEVIKEFDSMTPLDSWKTTLLLRVKEKLKAKELEEDDLT	289

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma14g00459	289	CDD	SNAP	7	278	IPR000744	GO:0006886
	Gma14g00459	289	PRINTS	NSF attachment protein signature	28	47	IPR000744	GO:0006886
	Gma14g00459	289	PRINTS	NSF attachment protein signature	91	108	IPR000744	GO:0006886
	Gma14g00459	289	PRINTS	NSF attachment protein signature	119	136	IPR000744	GO:0006886
	Gma14g00459	289	PRINTS	NSF attachment protein signature	152	175	IPR000744	GO:0006886
	Gma14g00459	289	PRINTS	NSF attachment protein signature	183	202	IPR000744	GO:0006886
	Gma14g00459	289	PRINTS	NSF attachment protein signature	224	244	IPR000744	GO:0006886
	Gma14g00459	289	PRINTS	NSF attachment protein signature	255	275	IPR000744	GO:0006886
	Gma14g00459	289	Coils	Coil	151	178	-	-
	Gma14g00459	289	PANTHER	ALPHA-SOLUBLE NSF ATTACHMENT PROTEIN	1	289	-	-
	Gma14g00459	289	SUPERFAMILY	TPR-like	7	280	IPR011990	GO:0005515
	Gma14g00459	289	Pfam	Soluble NSF attachment protein, SNAP	7	278	-	-
	Gma14g00459	289	PANTHER	SOLUBLE NSF ATTACHMENT PROTEIN SNAP	1	289	IPR000744	GO:0006886
	Gma14g00459	289	Gene3D	Tetratricopeptide repeat domain	6	288	IPR011990	GO:0005515

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma14g00459	Gma-Chr14	4371990	4375556	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma14g00459	K15296		-	gmx:100794564	510.375

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma02g02453	02	50636603	50638856	Gma14g00459	14	4371990	4375556	ECH
	Gma14g00459	14	4371990	4375556	Gma14g00459	14	4371990	4375556	ECH
	Gma18g00208	18	1669969	1674606	Gma14g00459	14	4371990	4375556	PCT
	Gma11g02367	11	39057425	39062247	Gma14g00459	14	4371990	4375556	PCT
	Gma14g00459	14	4371990	4375556	Gma18g00208	18	1669969	1674606	PCT
	Gma14g00459	14	4371990	4375556	Gma11g02367	11	39057425	39062247	PCT