Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00180 ATGTCGTCAAAATATCAGATTCTTGACAACCGCCCTATTAATCAGTGGAAGGTTACAGAGCTAAAAGATGAGCTGAAGAGGAGGAAGTTAAGTATCAAGGGTTTGAAGGATGATTTGGTCAAGCGTTTGGATGAAGTCCTTCGTCTTGAAAGGGAGGCTGATGAGGCTTCTGAGAAGGATGAGGCCAATGGTTTCGATGGTCATGTAGATGGGGAAAAAGATTCAGAGGCGGTTACTGTGGATGCTGAAATGGTTGATTCAACTGACAGGGACAATGCCAAAACATTTGAGACTGCTGAAAAGGGCAAGAGCGGTGTAGTTGATCCTGTTGAAATAGAAAATGTGGAAAAGATTCCGGAGGTTGTGGATCACGACAGCAATAAGAATGACAAGCAGGATGGTGTTACCAACCAAGTTGACATTAATAATAGTGTGTCAGCCATAGATCAAGAGGTTGAACCTAAGGGCTTGCCAGCTGGTGGAGATTCTGCAAATGTGGGACAGGAGGCAATTGCCCATGGTTCTACTGTGGAGAAGACTACCATTACAGTTAATGAGAGTGTAGTAACAGAAGTAGTGGCCAGTGCTGAGGATTCTTATCGTGCAGAAAAGAATAATGAGGATTCAGCAGCAAagctggagaatgaggagtcaaaggcgcagctggatggtgaggactcaaagccccagctggattgtgaCATCAAGCCCTTGCACGAGGATCCTGTGCCCGACTCTTCTGTTCCAGAAAACCAGGTATCTGAGGTCAACCCTAGTTTAGGGTCTCAAGTAAAATCTGATTCTATTTCTACTGATTCTCTGTCAATTAATCAAAAGAATGAACTAAAGGATACTATAATTACTGATAATGTCAAATTAGAACAAGATATTGTTAAGCCAGAGATGGTGGAAGAACCATCATCCAGAAATGATGTACCTGTTTCTTATGATGAATCACATTCAATGGATGTTGGAGGGCTGCATGAGAAAAAGGCATCTGTTGAAGAAAATTTCAATAATGTTTTAAGTCCAGACATGAACAAGACCAATAGCAGCGATGATGTGGGGTATCCCGAAGAGTTGAACTTGGACAGAAGTTCTGGTGATGATTCTATGGAAGAGGATTTGCCTGAGACTAAGCAAATTGATTCTAAGTTTAATGTTGATGAACTTAAAGACAAAATAGAGATTGAAGAGCCTATTGTGAAGGAGGAAAGTAGTACTATAGCTGTTGGAGATGGTCTGTCTGCAGGAGAAAGTGATATCCACCAAGATATTGACATTAGTCCAGTTGCTCCAACAGAGAAACGAAAATTTAATGAACAAGCATCAGTTGGGAACAATGAGCCTGCAAAAAGGCAACGCAGGTGGAACACTGAAACAGTTAAAGGTCCAGATGCACAAAGCACTACTCCCAGGCCTGCTACTACACCTAGAGATGAGCCAATTGCTTTGAAACGCAACTTCTCTAGGTCTGATTCCTCTGCAACTGATGATACACCTAAAGAACGCATTGTTCCACCACCACAAAGGTCCCCAACTAATTCCCTCAGGATTGATCGTTTTCTCCGTCCATTTACCCTAAAAGCAGTGCAAAAACTTCTTGGTAAGACTGGGAATGTCAGCAGCTTCTGGATGGACCAAATAAAGACCCATTGCTATGTGACTTACTCGTCTGTGGAAGAAGCCATTGAGACACGGAATGCTGTATATAATTTGCAATGGCCACCAAATGGTGGGCGTCTCTTAGTTGCTGAGTATGTTGATCCTGAAGAAGTGAAAATGAAGTTAGAACCTCCTCCTACTCAGGCTGCATCTGTCAGCACTGTCCCAGCAGTTCCTCCTGCACCTCCCTCACAGCCAGAGCCTTCCCCTCGTCTGCACAGGGAGCCACATCCAGTTCCAGCTACTCTCCCACCTCCACCACCATTGTCAAAACCCCCACCAGTAGCAAGAGAACGGCTTCCATCTCCACCACCCCTTCCTGAGAAAGTTGACCCACCCATTGTCACTCTGGATGATCTCTTTCGCAAAACCACAGCCACTCCTCGGATCTACTATCTACCTTTGTCTGAAGAGCAAGTTGCCTCAAAACTTACAGCACAGGGTAAAAGCGCGAGGCAGTAG 2127 0.4269 MSSKYQILDNRPINQWKVTELKDELKRRKLSIKGLKDDLVKRLDEVLRLEREADEASEKDEANGFDGHVDGEKDSEAVTVDAEMVDSTDRDNAKTFETAEKGKSGVVDPVEIENVEKIPEVVDHDSNKNDKQDGVTNQVDINNSVSAIDQEVEPKGLPAGGDSANVGQEAIAHGSTVEKTTITVNESVVTEVVASAEDSYRAEKNNEDSAAKLENEESKAQLDGEDSKPQLDCDIKPLHEDPVPDSSVPENQVSEVNPSLGSQVKSDSISTDSLSINQKNELKDTIITDNVKLEQDIVKPEMVEEPSSRNDVPVSYDESHSMDVGGLHEKKASVEENFNNVLSPDMNKTNSSDDVGYPEELNLDRSSGDDSMEEDLPETKQIDSKFNVDELKDKIEIEEPIVKEESSTIAVGDGLSAGESDIHQDIDISPVAPTEKRKFNEQASVGNNEPAKRQRRWNTETVKGPDAQSTTPRPATTPRDEPIALKRNFSRSDSSATDDTPKERIVPPPQRSPTNSLRIDRFLRPFTLKAVQKLLGKTGNVSSFWMDQIKTHCYVTYSSVEEAIETRNAVYNLQWPPNGGRLLVAEYVDPEEVKMKLEPPPTQAASVSTVPAVPPAPPSQPEPSPRLHREPHPVPATLPPPPPLSKPPPVARERLPSPPPLPEKVDPPIVTLDDLFRKTTATPRIYYLPLSEEQVASKLTAQGKSARQ 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00180 708 Coils Coil 18 59 - -
Gma18g00180 708 MobiDBLite consensus disorder prediction 340 384 - -
Gma18g00180 708 MobiDBLite consensus disorder prediction 611 666 - -
Gma18g00180 708 MobiDBLite consensus disorder prediction 358 384 - -
Gma18g00180 708 SMART sap_9 13 47 IPR003034 -
Gma18g00180 708 MobiDBLite consensus disorder prediction 484 500 - -
Gma18g00180 708 MobiDBLite consensus disorder prediction 50 79 - -
Gma18g00180 708 MobiDBLite consensus disorder prediction 195 272 - -
Gma18g00180 708 CDD RRM_ACINU 514 598 IPR034257 -
Gma18g00180 708 ProSiteProfiles SAP motif profile. 13 47 IPR003034 -
Gma18g00180 708 MobiDBLite consensus disorder prediction 247 272 - -
Gma18g00180 708 MobiDBLite consensus disorder prediction 461 476 - -
Gma18g00180 708 MobiDBLite consensus disorder prediction 340 356 - -
Gma18g00180 708 MobiDBLite consensus disorder prediction 299 322 - -
Gma18g00180 708 PANTHER SAP DNA-BINDING DOMAIN-CONTAINING PROTEIN 1 705 - -
Gma18g00180 708 MobiDBLite consensus disorder prediction 598 670 - -
Gma18g00180 708 Gene3D SAP domain 13 62 IPR036361 -
Gma18g00180 708 SUPERFAMILY RNA-binding domain, RBD 508 596 IPR035979 GO:0003676
Gma18g00180 708 PANTHER SAP DNA-BINDING DOMAIN-CONTAINING PROTEIN 1 705 - -
Gma18g00180 708 MobiDBLite consensus disorder prediction 404 516 - -
Gma18g00180 708 Pfam RNSP1-SAP18 binding (RSB) motif 663 703 IPR032552 -
Gma18g00180 708 MobiDBLite consensus disorder prediction 119 141 - -
Gma18g00180 708 Pfam SAP domain 13 45 IPR003034 -
Gma18g00180 708 MobiDBLite consensus disorder prediction 197 243 - -
Gma18g00180 708 SUPERFAMILY SAP domain 13 50 IPR036361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00180 Gma-Chr18 1489520 1492372 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00180 K12875 - gmx:100786288 1307.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00180 18 1489520 1492372 Gma11g02392 11 39283434 39286254 GST