Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02392 ATGTCGCCAAAATATCAGATTCTCCACAATCGCCCCATCAATCAGTGGAAGGTTACAGAGCTGAAAGATGAGCTGAAGAGGAGGAAGATAAGTACCAAGGGTTTGAAGGATGATTTGGTCAAACGTTTGGACGAAGTCCTTCGTCTGGAAAGGGAGGTTGATGAGGCTTCTGAGAAGGATGAGGCCAATGGTTTCGATGGTCATGCAGATGGGAAAAAAGTTCCGGAAGCAGTTACTGTGGATGCTGAAATGGTTGATTCAACTGACAGGGCCAGTGCCAAAACATTTGATACTGCTGAAAAGGGCAAGGGTGGTTTTGTTGATCCAATTGAAACGGGAAATGTGGAAAAGATTCAGGAGATTGTGGATCATGACAGCGATAAGAATGACAAGCAGGACAGTGTTTCCAACCAAGTTAACATTAATAATAGTGTGTCAGCTATGGATCAAGAGGTTGAACCTAAGGGCTTGCCAGCTGGTGGAGATTATGCAAATGTGGGACATGAGGCAATTGCCCATGCTTCTACTGTGGAGACTATCATTACGGTCACTGAGAGTGTAGTAACAGAAGTAGTGGCCAGTGGTGAGGATACTTATCGTGCCGAAAAGAATAATGAGGATTCAGCAGCACAGCTGGAGAATGAGGTGTCAAAGGCGCAGCTGGATGGTGAGGACTCAAAGCCCCAACTGGATTATGACACCAAGCCCTTGCATGAGGATCCTGTTCCCGACTCTGCTGTTCCAGAAAACCAGGTATCTGAGGTCAACCCTAGTTTAGGGTCTCAAGTAAAATCTGATTCTATTTCTACTGATTCTCTGTCAATTAATCAAAAGAATGAACTAAAGGATACTATAATTACTGATAATGTCAAATTAGAACAAGATATTGTTAAGCCGGAGATGGTGGAAGAACCATCATCCAGAAATGATGTTCCTGTTTCTTATGATGAATCACATTCAATGGATGTTGGAGGGCTGCATGAGAAAAAGGCATCTGTTGAAGAAAATATCAATAATGTTTCAAGTCCAGACTTGAACAAGACCAATAGCAGTGATGATGTAGGGTATTCAGAAAAGTTGAACTTGGACAGAAGTTCTGGTGATGATTCTATGGAAGAGGATTTGCCTGAGACTAAGCAAATTGATTCTAAGTTTAATGTTGATGAACTTAAAGACAAAGTAGAGATTGAAAAGCCTATTGTGAAGGAGGAAAGTAGTACTATAGCTGTTGGAGATAGTCTATCTGCAGGAAAAGATGATACCCACCAAGATATTGACATTAGTCCTGCTGCCCTGACTGAGAAACGGAAATTTAATGAAGTTGGGAACAGTGAGCCTGCCAAAAGGCAACGCAGGTGGAACACTGAAACAGTTAAAGGTCCAGATGCACAAAGCACTACTCCCAGGCCTGCTACTACACCTAGAGATGAGCCAATTACTTTGAAACGCAGCTTCTCTAGGTCTGATTCCTCTGCAACTGATGATACACCTAAAGAACACATTGTTCCACCATCACAAAGGTCCCCAACTAATTCCCTCAGAATTGACCGTTTCCTCCGTCCATTTACCCTAAAAGCAGTGCAAGAACTTCTTGGTAAGACTGGGAATGTCAGCAGCTTCTGGATGGACCAAATAAAGACCCATTGCTATGTTACTTACTCATCTGTGGAAGAAGCTATTGAGACACGGAATGCTGTATATAATTTGCAATGGCCACCAAATGGTGGGCGTCTCTTAGTTGCAGAGTATGTTGATCCTGAAGAAGTGAAAATGAAGTTAGAACCTCCTCCTACTCAGGCTGCATCGGACAGCACTGATCGAGCAGTTCCTCCTGCTCCCCCCTTCTCACAGCCAGAGCCTTCCCCCCATCTGCACAGGGAGCAGCATCCAGTTCCAGTCATTCTCCCACCTCCACCACCATTGTCAAAACCCCCACCAGTAGCAAGAGAACGGCTTCCATCTCCACCACCCCTCCCTGAGAAAGTTGACCCACCTATTGTCACTCTGGATGATCTCTTCCGCAAAACCACAGCAACTCCTCGGATCTACTATCTACCTTTGTCTGAAGAGCAAGTTGCCGCAAAACTTTCAACACAGGGTAAAAGCGGGAGGCAGTAG 2118 0.4448 MSPKYQILHNRPINQWKVTELKDELKRRKISTKGLKDDLVKRLDEVLRLEREVDEASEKDEANGFDGHADGKKVPEAVTVDAEMVDSTDRASAKTFDTAEKGKGGFVDPIETGNVEKIQEIVDHDSDKNDKQDSVSNQVNINNSVSAMDQEVEPKGLPAGGDYANVGHEAIAHASTVETIITVTESVVTEVVASGEDTYRAEKNNEDSAAQLENEVSKAQLDGEDSKPQLDYDTKPLHEDPVPDSAVPENQVSEVNPSLGSQVKSDSISTDSLSINQKNELKDTIITDNVKLEQDIVKPEMVEEPSSRNDVPVSYDESHSMDVGGLHEKKASVEENINNVSSPDLNKTNSSDDVGYSEKLNLDRSSGDDSMEEDLPETKQIDSKFNVDELKDKVEIEKPIVKEESSTIAVGDSLSAGKDDTHQDIDISPAALTEKRKFNEVGNSEPAKRQRRWNTETVKGPDAQSTTPRPATTPRDEPITLKRSFSRSDSSATDDTPKEHIVPPSQRSPTNSLRIDRFLRPFTLKAVQELLGKTGNVSSFWMDQIKTHCYVTYSSVEEAIETRNAVYNLQWPPNGGRLLVAEYVDPEEVKMKLEPPPTQAASDSTDRAVPPAPPFSQPEPSPHLHREQHPVPVILPPPPPLSKPPPVARERLPSPPPLPEKVDPPIVTLDDLFRKTTATPRIYYLPLSEEQVAAKLSTQGKSGRQ 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02392 705 PANTHER SAP DNA-BINDING DOMAIN-CONTAINING PROTEIN 1 702 - -
Gma11g02392 705 SUPERFAMILY SAP domain 13 50 IPR036361 -
Gma11g02392 705 Coils Coil 202 222 - -
Gma11g02392 705 MobiDBLite consensus disorder prediction 218 242 - -
Gma11g02392 705 ProSiteProfiles SAP motif profile. 13 47 IPR003034 -
Gma11g02392 705 Pfam SAP domain 13 45 IPR003034 -
Gma11g02392 705 MobiDBLite consensus disorder prediction 457 473 - -
Gma11g02392 705 MobiDBLite consensus disorder prediction 631 663 - -
Gma11g02392 705 MobiDBLite consensus disorder prediction 398 509 - -
Gma11g02392 705 MobiDBLite consensus disorder prediction 335 356 - -
Gma11g02392 705 Pfam RNSP1-SAP18 binding (RSB) motif 660 699 IPR032552 -
Gma11g02392 705 SMART sap_9 13 47 IPR003034 -
Gma11g02392 705 MobiDBLite consensus disorder prediction 593 665 - -
Gma11g02392 705 Gene3D SAP domain 13 62 IPR036361 -
Gma11g02392 705 MobiDBLite consensus disorder prediction 284 305 - -
Gma11g02392 705 SUPERFAMILY RNA-binding domain, RBD 504 592 IPR035979 GO:0003676
Gma11g02392 705 MobiDBLite consensus disorder prediction 53 114 - -
Gma11g02392 705 MobiDBLite consensus disorder prediction 357 382 - -
Gma11g02392 705 MobiDBLite consensus disorder prediction 417 456 - -
Gma11g02392 705 Coils Coil 39 59 - -
Gma11g02392 705 MobiDBLite consensus disorder prediction 202 382 - -
Gma11g02392 705 MobiDBLite consensus disorder prediction 480 496 - -
Gma11g02392 705 CDD RRM_ACINU 510 594 IPR034257 -
Gma11g02392 705 MobiDBLite consensus disorder prediction 249 283 - -
Gma11g02392 705 MobiDBLite consensus disorder prediction 53 79 - -
Gma11g02392 705 PANTHER SAP DNA-BINDING DOMAIN-CONTAINING PROTEIN 1 702 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02392 Gma-Chr11 39283434 39286254 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02392 K12875 - gmx:100816245 1321.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00180 18 1489520 1492372 Gma11g02392 11 39283434 39286254 GST