Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00107 ATGTTCCGCAATGGCAGCAACCATAGCAGCAACAATGGCTATGATAAACTCCAAGTGTTTGAACCCAATAACAGGGTCATCACCCAAGTCGAACAATCCCAAGCTCCCACCTTCAAAACCCACACTCTCCCTCTTCTCCATTCAGAACTTCCCAAAGGGAATAACCTCCAACCCTTGGCTGCGTCGCAAATTGCTGAAATAGCAGAAGGCGATAACCGTGGGCTGGCACTGCTGTTGCCATTGATTCCCGCCATAGTGTGGGTGCTGTTCAACATTCTGCAGCCAGCGCTGAACCAACTGAACCGCATGCGTAGCAGCAAGGGGGTCATCATTGGGCTTGGGCTCGGGCTGGGCGCATCGGGCATGCTTTTTGGCTCAGATGCATCGGCTAGTGAGATTGCTGTGATTGCTGATGCTGCCGCCAGTGACAACAGGGGACAGCTTTTGCTTATTGTGGTTACACCTGCGATTGTTTGGGTTATGTACAACATTTTGCAACCGGCACTCAACCAGCTTAACAGAATGAGATCAGAGTAG 537 0.5102 MFRNGSNHSSNNGYDKLQVFEPNNRVITQVEQSQAPTFKTHTLPLLHSELPKGNNLQPLAASQIAEIAEGDNRGLALLLPLIPAIVWVLFNILQPALNQLNRMRSSKGVIIGLGLGLGASGMLFGSDASASEIAVIADAAASDNRGQLLLIVVTPAIVWVMYNILQPALNQLNRMRSE 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00107 178 PANTHER PHOTOSYSTEM II CORE COMPLEX PROTEINS PSBY, CHLOROPLASTIC 59 177 IPR038760 GO:0009523
Gma18g00107 178 Hamap Photosystem II protein Y [psbY]. 71 105 IPR009388 GO:0009523|GO:0015979|GO:0016021|GO:0030145
Gma18g00107 178 Pfam Photosystem II protein Y (PsbY) 143 175 IPR009388 GO:0009523|GO:0015979|GO:0016021|GO:0030145
Gma18g00107 178 Pfam Photosystem II protein Y (PsbY) 71 103 IPR009388 GO:0009523|GO:0015979|GO:0016021|GO:0030145
Gma18g00107 178 PANTHER PHOTOSYSTEM II CORE COMPLEX PROTEINS PSBY, CHLOROPLASTIC 59 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00107 Gma-Chr18 849502 850109 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00107 K02723 - gmx:100814665 176.792
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00107 18 849502 850109 Gma18g00107 18 849502 850109 ECH
Gma18g00107 18 849502 850109 Gma11g02470 11 39983780 39984756 GST
Gma08g01196 08 10210377 10210955 Gma18g00107 18 849502 850109 PCT