Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00102 ATGGCAATGATTCCTTACCACCTTTGCCGTTTACCTTACCAGGATTCCCTCAAAGCACTTGAGGCTGATATACAGCACGCCAATGCTTTGGCTGCTGCAATTCCCAGAGCCAAGGGTGAGACTCTTCTTCAAATGAAATTGGTTTACAATCACTTGGCTCCCCTCTTCCTGTTATTTCTACAATGGATGGATTGTTCTTGTGCAGGCTTTCTCCATAGGTATCTCGACCTCTTCCACATACTTATTTACAAGGTACATAATGATGGTAGATCAATCATGCCTACTCATGGAAGGAAGGCTACCATTGGGGACTTTTATGCTGTTATATTACCATCTCTCCAACGGCTTCATGGTAGTTTGGAGAAGTTGGAGGTTGTTAAAGAAGAAGGCCAGTCAAGCATAGAAGGTCCAAGTTATGGCAAGAAGGTCATTGAAGAAGGTGTGAAACTAACGGCCAATGTTGATTTGCAAAGAGAAGATGAATGTGGGATTTGCTTAGAGCCTTGCACCAAAATGGTTTTACCTGGTTGCTGCCATGCCATGTGTATTAAATGCTACCGCAAGTGGAACAGAAAGTCAGAGTCTTGTCCTTTTTGCCGTGGTAGCTTGAGGAGAGTTAATTCGGAGGATCTATGGGTATTAACTTGTAATGATGATGTTGTTGATGCTGAAACAGTTTCTAAAGAGGACTTGTTGCGTTTTTATCTCTATGTCAGCAAGCTGCCTAAAGATCACCCAGATGCACTTTTCCTAATGTGCGCATTTACAGTTTGTTTGGCTCTCACTCTTCTGTTTCAGGAAAGAAACAGAAATTGCAGATCCAAATCTCGTTTTGGAGTGAGGAATTTGAATGTTGAGATGTCTGAGAATCACGTAGCAGGGCAGGTTTCGGAAGCGGATTCGGATTCGGGTCATGGTGTTGTGCACGACGAATCAAATGTGGATACCGAATCAAACACTGATACTTATCAAGATCAGGGAGAGCGTGTTGATCTCAGAGATCCTGAAGATGGAAAATCTACAGAGGATTCTGCCAGAGATGACATGTTTGTTGATTGCCCTGATGAGTTAACCACATTTGATGGTAGGCAAAAGGAGGAGGAAGTTGCTGCTGCGAAAAATGAAGATGACGGATCAGAGGAAAATGAAGTTATGCATCAACAGCAGAGTCATTTTGATAAATTGGGCAATGGAGTGGGAGATGGTTACTCCTCAGGCCAGCTAGAGAAAGTTGTTGCTCAGAAGGAAATTATTTTGAAGGAATACCAGGAAGAAAGACAAACTGTTACTCAAGGAGTGCTTGATCTTTGTTGTCAGCTGAAGACTCTCACTGGTCAACAGAATGAAGCTGAAGTTGGAGATAGGGAAGTGACTGATGTTTCATTGAGGGAGATGATAAAGGAATGTTTGGAGTTTGTGAAGACCGCCTCAGAAGAACAGTCAAACAGTGAAACTACTATAAATAATCTTCGTGAACATCTATCTACAAAGGACCGTGAGATAGAGGATCTTAATGCAAAGCTTGCCCAATTAATGGTATCTAATGAAAGTATGCAAGTTTCATCCGAAGCTCAACTTGAAAAGGATCGTAATGTTGAGATTGTGATAGATAAGATGATATCTTCTCTTGCAACAGTTGTTACTCGAGAGCAAGTATTGGATGATTCTATTAGTGGGAAAATAGTTTATATTGAGGAAGGCACTATCCATTTAATTGAAAAGTATAATCAGATTCTTTCTGAAATTTATCAACTTGGGCAATCTTTCTCTGAGGTAGGCTTGGATACTAACGAGCATGAATACGGGAACATACTCGCTGATGCTCGTGGTGGGTTACTGGAGCTCAAAAAAAAGGAAACAGAATTGGTTGAAAAACTGGCTCATTTAGAAGATGAAAATCAGAAAATGGTTGATGAGCTTGACAAGGGAAAGGTGATGATAAGGACATTAAATACTGAACTTGGAAATCTGAAAATAGAACTCGAGCAGGAAAAGGTTAAATGTGCTAATACGAAAGAAAAGCTCAGTATGGCTGTGACAAAAGGAAAGGCATTGGTACAGCAGCGAGATTCATTAAAGAAGTCTCTGGCTGATAAATCCGGTGAGCTTGATAAATGTTTGATTGAATTGCAAGAGAAGTCAGTTGCACTACAAGCTGCTGAACTTGCTAAGGAGGAGTTGTCCCAAAGTGAAAATATGGTTGCATCCCTGCAGAACTCATTACTAGAAAAGAATGCAGTTATTGATCAAGTGGAAGAAATCTTGTCTCAGGCAAAACCTGATGAACCTGAAATGTTTGATATGCCAGAGAAACTAAGATGGCTTGTGGATGACAGAAATACTTTGAAGGAAGCCTTCCTAGAGCTATGCAAATTGAAGAAAGCTCTATCTCTAGCGGACCTGCCAGAGCCTGTTTCGTCATCTGATTTGGAATCACAAATGAAATGGCTTACAGATTCTTTGCTCAGGGCCCATGACAACATGCATACTCTACAGGAAGAAATTTCCACAATCAAGGAATCATCCCGTAACTATATTGATCAGCTTAGTGTTTCTCTTTTGCTGGCATTGCAGGAAAAAGATTACCTTCTGTCAGAATTAACTGATTTGAGGTTCAAATATGATGAGCTTGTTAGCAAGAACCATCAGATTTCTTTGGAGAAGGATCAGATAGTGCATATGTTAGTCGATCTTTGTGGTCTGAACTTGGAAGATGAAGGGATTGATCAAATCTCTTCCAGCACTTATACGATCATCAATTTATGCTTTAAAGTTATCAAAGGACAGAGTGGTCCCTTGTCTAGAGCATCCCATATTGATGCTGAGTTGTTTGAAAGGATTCAAAGTCTCTTGTATGTTAGAGATCAGGGATTAATACTCTATGAAGATATACTGGAAGAGGAGATGCTAATTAGATCAGATGTGAATAAGCTGTCAAATGAGTTGAAAGTGGTATCTGAGGAAATTATAGCACTGAAAGAAGAAAGGAGTTCTCTGCTGCAAGATCTTGAGCGATCAGAGGAGAAGACTTCCATGCTTAGGGACAAGTTGTCCATGGCAGTTAAGAAAGGAAAGGGGCTGGTTCAAGATAGGGACAATCTAAAAGGTCTTCTAAATGAAAAGAACTCAGAGATTGAGCAGTTGAAGGCTGATTTGCAGAAGCAAGAATCTGCAGTTTCTGAATACAGGGATGAGATCAATAGATTGTCCAATGATGTGGAAAGCATCCCGAAGCTGGAGGCTGATCTTCTGGAAATGAAAAGGGATAAGAATCAGTTTGAACAGTTCTTAATGGAGAGCAATAACATGTTACAGAAAGTGATGGAGTGTATTGACGGTGTTGCTCTTCCAGTTGTTCCAGTTTTTGATGAACCAATAGAGAAGGTGAAGTGGCTTGCTGGTTATGTCAATGAATGTCAAGATGCTAAGGTACACAGAGAACAGGAATTGCAGCTAGTGAAGGAAAATGCCAGTATACTTGAAATTAAATTAGCAGAAGCCCAAGCAACTGTAAAATCCCTTGAACAGGAATTATCATCTTCAGATGACAATGTTTCTCAACTTGCTGAAGAAAAAATTGAGTTAGAACATGGCAAAGTGAAAGTTGAGGAAGAGTTACAGAAAGTTAAAGATAAAGTTGCTGAAGTTTGTAATACTACTAAGTCACTTGAAGATGCCTTATCACAAGCAGAAAAAGAAATTTCTATTCTTTCCGAAGAGAAAGAGCAGGCTCAAGTTAGCAGAGTTGCTGCAGAGAGAGAGTTAGAGATTTTTAAAGATGAAGCAGCCAGGCAAACAAGCATACTGGCAGAGGCTAGCAAGACCATTAAGGATCTAGAAGATAAACTATCTCAGGTTGAGGGTAATGCCAATTTATTGACTGAAAAGTATAATGCCGATCAAGTTGCCAAAATTGACATGGGAAATGAATTGAAGAAGCTACAAGATGAAGCTTCAAATCATGCTAGTAAACTGGTGGGTGCCTCTGGAACTATAAAATCACTGGAGGATGCATTATTGAAGGCGCAAGATGATATTTCTGCCTTAGAAGATGCAAATAAAATTGCGAAACAGGAGATATCTTCACTTGGCTTTAAGTTAAATTCATGCATGGACGAGTTAGCTGGAAAGAGTGGCAGCTTAGAAAACAAGTCCTTACAGCTCATTGGACTCCTTAATGATCTTCAGGTGCTCATGAAAGATACTACTCCATTTCCCGGAATTAAACAATGCTTTGAGAGCAAATGTGAGACGCTAAAGAATATGAATCTCATTCTGAACAAAATAAGAGATAATGTTGCCATGACTGCAAAGGATTCAAAGGGACAGCCTGTGATGGTGGAAAATCCACTTGTGAGAGAAACATTCTTGGACAGCCCTGAAAATTATGAAGTTGAACTGGACAATACAGAGATTGATGGTGCTGACATTGACACCATAATCTCATCATTTGGAAAGATTGTGAAAGGATTTCAGTCGAGAAACAAACACATTGCAGATAAGTTTTATGAATTTTCGGATTTTATGGATGAGTTTATTTCTCCTCTCCATGAAAAACTACTGGAAACAGAGACCATGTCAACGACTATTGTTGAGAACATGGAAATTATGAAAAAAGAAGCAAATACCATGGAAAAATTGAAAGAAGAACAGGAAAATACTATTGCCACTTTAGAAAACAATGTCAGTGTATTGCTATCTGCTTGCACAGACTCTACCATTGCACTTCAGAGTGAAGTTGACAAGAATCTTGGGCAGCCAGGCTCCATTTCCGAGGTTGAACAGTTAAACCTTGAAGCAGGTGCACAAACAGAGCATCATAAGAACAGCAAATACGTGGAAGCCACACATAAGTTGATGAATGCTTCTAGAAAAGCTCAAACTTTGATTGCACAGTTTGGATGTAGAAGTGAGCAAGTGGATGCAACAATTGAAGATTTGCGGAATAAATTGAAAGAAACAACTGTTGCTTTTGAATTAGTCACTGATGAGAGAGACTTGAATAAAAACAGAGTTTCACAACTGGAGTCTGATATTCAATCACTGCAAAGTGCTTGCAGTGAGCTTAAGGATAAGTTAGAGGATTATCATGCCTTGGAAGAAAAATTAGAGGAAAAAGAGGCTGAGATTTCATCAATGCACAATGCTTTGTTGGCAAAAGAAGAAAACTCCCTCTTTCCAGCATCTCAAATGAGAGATCTCTTTGACAAGATAGATAGGATCAAAATCCCTATTGTAGAGTCCAAAGAAGATGATTTGGAGCCACATACTTCAGCCCCTATGAGAAAACTCTTTTATATTATTGATAGTGTTCCTAGGTTGCATGATCAAATAAACTCTCTGTCTCATGATAAAGAAAAGCTGCAATCAATCCTTGAAACTAGGGATCTTGACATTAAGGATCTGAAGGATGAAGTCAAACAACTCAATAGAATCTGTGAAGACTCTAAAATGATCAAGAATGAATTGTCTGAGCTCACCTATGTATTAGAAAAAATTATGGATATTTTGGGAGCTGGTGAATGGGTTGTAGATAGGAAATCTAAAGGTTCGAAGGAATTAATACCAGCATTGGAGAAGCATATCATTGCCATTCTTTCAGAATCTGAAAATTCAAAATCCAAGGCTCAGGAACTTGATATTAAGTTAGTTGGAAGTCAGAAGGTTATTGATGAATTAACGACCAAGGTTAAATTACTTGAAGATTCACTCCAAGATAGGACTTCTCAGCCAGACATTGTACAGGAGAGGAGCATATATGAAGCACCCTCATTACCTGCTGGATCTGAGATAATTGAAGTTGAAGAGGGATCATCACTTAGCAAGAAAGCAATATCTCCTGTCCCATCGGCTGCTCATGTGCGGAATATGCGAAAAGGATCTACTGACCATCTTGCACTCGATATTAGTGGGGAGTCTGATAATTTGATTAACAGGGTAGATAAGGATGATGATAAAGGTCATGTATTCAAGTCTCTGAGCACTACTGGATTCGTACCAAAACAGGGAAAGCTCATTGCAGATCGTATTGATGGACTCTGGGTATCTGGTGGCCGGGTTCTCATGAGTCATCCTAGAGCAAGATTAGGACTTATTGGCTATTTGTTTGTCTTGCATATATGGCTACTGGGGACGATCTTGTAG 6144 0.3953 MAMIPYHLCRLPYQDSLKALEADIQHANALAAAIPRAKGETLLQMKLVYNHLAPLFLLFLQWMDCSCAGFLHRYLDLFHILIYKVHNDGRSIMPTHGRKATIGDFYAVILPSLQRLHGSLEKLEVVKEEGQSSIEGPSYGKKVIEEGVKLTANVDLQREDECGICLEPCTKMVLPGCCHAMCIKCYRKWNRKSESCPFCRGSLRRVNSEDLWVLTCNDDVVDAETVSKEDLLRFYLYVSKLPKDHPDALFLMCAFTVCLALTLLFQERNRNCRSKSRFGVRNLNVEMSENHVAGQVSEADSDSGHGVVHDESNVDTESNTDTYQDQGERVDLRDPEDGKSTEDSARDDMFVDCPDELTTFDGRQKEEEVAAAKNEDDGSEENEVMHQQQSHFDKLGNGVGDGYSSGQLEKVVAQKEIILKEYQEERQTVTQGVLDLCCQLKTLTGQQNEAEVGDREVTDVSLREMIKECLEFVKTASEEQSNSETTINNLREHLSTKDREIEDLNAKLAQLMVSNESMQVSSEAQLEKDRNVEIVIDKMISSLATVVTREQVLDDSISGKIVYIEEGTIHLIEKYNQILSEIYQLGQSFSEVGLDTNEHEYGNILADARGGLLELKKKETELVEKLAHLEDENQKMVDELDKGKVMIRTLNTELGNLKIELEQEKVKCANTKEKLSMAVTKGKALVQQRDSLKKSLADKSGELDKCLIELQEKSVALQAAELAKEELSQSENMVASLQNSLLEKNAVIDQVEEILSQAKPDEPEMFDMPEKLRWLVDDRNTLKEAFLELCKLKKALSLADLPEPVSSSDLESQMKWLTDSLLRAHDNMHTLQEEISTIKESSRNYIDQLSVSLLLALQEKDYLLSELTDLRFKYDELVSKNHQISLEKDQIVHMLVDLCGLNLEDEGIDQISSSTYTIINLCFKVIKGQSGPLSRASHIDAELFERIQSLLYVRDQGLILYEDILEEEMLIRSDVNKLSNELKVVSEEIIALKEERSSLLQDLERSEEKTSMLRDKLSMAVKKGKGLVQDRDNLKGLLNEKNSEIEQLKADLQKQESAVSEYRDEINRLSNDVESIPKLEADLLEMKRDKNQFEQFLMESNNMLQKVMECIDGVALPVVPVFDEPIEKVKWLAGYVNECQDAKVHREQELQLVKENASILEIKLAEAQATVKSLEQELSSSDDNVSQLAEEKIELEHGKVKVEEELQKVKDKVAEVCNTTKSLEDALSQAEKEISILSEEKEQAQVSRVAAERELEIFKDEAARQTSILAEASKTIKDLEDKLSQVEGNANLLTEKYNADQVAKIDMGNELKKLQDEASNHASKLVGASGTIKSLEDALLKAQDDISALEDANKIAKQEISSLGFKLNSCMDELAGKSGSLENKSLQLIGLLNDLQVLMKDTTPFPGIKQCFESKCETLKNMNLILNKIRDNVAMTAKDSKGQPVMVENPLVRETFLDSPENYEVELDNTEIDGADIDTIISSFGKIVKGFQSRNKHIADKFYEFSDFMDEFISPLHEKLLETETMSTTIVENMEIMKKEANTMEKLKEEQENTIATLENNVSVLLSACTDSTIALQSEVDKNLGQPGSISEVEQLNLEAGAQTEHHKNSKYVEATHKLMNASRKAQTLIAQFGCRSEQVDATIEDLRNKLKETTVAFELVTDERDLNKNRVSQLESDIQSLQSACSELKDKLEDYHALEEKLEEKEAEISSMHNALLAKEENSLFPASQMRDLFDKIDRIKIPIVESKEDDLEPHTSAPMRKLFYIIDSVPRLHDQINSLSHDKEKLQSILETRDLDIKDLKDEVKQLNRICEDSKMIKNELSELTYVLEKIMDILGAGEWVVDRKSKGSKELIPALEKHIIAILSESENSKSKAQELDIKLVGSQKVIDELTTKVKLLEDSLQDRTSQPDIVQERSIYEAPSLPAGSEIIEVEEGSSLSKKAISPVPSAAHVRNMRKGSTDHLALDISGESDNLINRVDKDDDKGHVFKSLSTTGFVPKQGKLIADRIDGLWVSGGRVLMSHPRARLGLIGYLFVLHIWLLGTIL 2047
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00102 2047 Coils Coil 1890 1910 - -
Gma18g00102 2047 PANTHER BNAA09G28150D PROTEIN 1358 2047 - -
Gma18g00102 2047 PANTHER - 1244 1296 - -
Gma18g00102 2047 PANTHER - 331 1199 - -
Gma18g00102 2047 PANTHER - 1300 1353 - -
Gma18g00102 2047 Coils Coil 1534 1568 - -
Gma18g00102 2047 Coils Coil 1332 1359 - -
Gma18g00102 2047 Coils Coil 1792 1819 - -
Gma18g00102 2047 Coils Coil 1644 1723 - -
Gma18g00102 2047 Coils Coil 1031 1072 - -
Gma18g00102 2047 MobiDBLite consensus disorder prediction 303 388 - -
Gma18g00102 2047 PANTHER - 1199 1247 - -
Gma18g00102 2047 PANTHER - 1358 2047 - -
Gma18g00102 2047 Coils Coil 487 514 - -
Gma18g00102 2047 Coils Coil 647 674 - -
Gma18g00102 2047 MobiDBLite consensus disorder prediction 295 401 - -
Gma18g00102 2047 ProSitePatterns Zinc finger RING-type signature. 177 186 IPR017907 -
Gma18g00102 2047 SUPERFAMILY Tropomyosin 1132 1364 - -
Gma18g00102 2047 SUPERFAMILY RING/U-box 152 204 - -
Gma18g00102 2047 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 139 210 IPR013083 -
Gma18g00102 2047 Coils Coil 612 639 - -
Gma18g00102 2047 Coils Coil 1150 1296 - -
Gma18g00102 2047 SMART ring_2 162 199 IPR001841 -
Gma18g00102 2047 PANTHER BNAA09G28150D PROTEIN 1244 1296 - -
Gma18g00102 2047 PANTHER BNAA09G28150D PROTEIN 1300 1353 - -
Gma18g00102 2047 Coils Coil 405 425 - -
Gma18g00102 2047 Pfam Ring finger domain 160 200 IPR001841 -
Gma18g00102 2047 ProSiteProfiles Zinc finger RING-type profile. 162 200 IPR001841 -
Gma18g00102 2047 PANTHER BNAA09G28150D PROTEIN 1199 1247 - -
Gma18g00102 2047 PANTHER BNAA09G28150D PROTEIN 331 1199 - -
Gma18g00102 2047 Coils Coil 710 740 - -
Gma18g00102 2047 Coils Coil 975 1009 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00102 Gma-Chr18 805203 817700 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00102 - - gmx:100800411 3322.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00102 18 805203 817700 Gma18g00102 18 805203 817700 ECH
Gma18g00102 18 805203 817700 Gma11g02476 11 40010719 40021486 GST