Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02476 ATGGCAATGATTCCGTACCACCTTTGCCGTTTACCTTACCAGGATTCCCTCAAAGCACTTGAAGCTGATATACAGCACGCCAATGCTTTGGCTGCTGCAATTCCCAGAGCCAAGGGTGGAACTCTTCTTCAAATGAAATTGGTTTACAATCACTTGGCTCCTCTCTTCCTGTTATTTCTACAATGGATGGATTGTTCTTGTGCAGGCTTTCTCCATAGGTATCTCAACCTCTTCCACATACTTGTATACAAGGTACATAATGATGGTAGATCAATCATGTCTACTCATGGAAGGAAGGCTACCATTGGTGACTTTTATGCCGTTATATTGCCATCTCTCCAACGGCTTCATGGTAGTTTGGAGAAGTTGGAGGTTGTTGAAGAAGAAGAAGGACAGTCAAGCATAGAAGGTCCAAGTTATGGCAAGAAGGTCATTGAAGGTGTGAAACTAACCACCAATGTTGATTTGCAAAGAGAAGATGAATGTGGTATTTGCTTAGAGCCTTGCACCAAAATGGTTTTACCTGGTTGCTGCCATGCCATGTGTATTAAATGCTACCGCAAGTGGAACAGAAAGTCAGAGTCTTGTCCTTTTTGCCGTGGTAGCTTGAGGAGAGTTAATTCGGAGGATCTATGGGTATTAACTTGTAATGATGATGTTGTTGATGCTGAAACAGTTTCTAAGGAGGATTTGTTGCGGTTTTACCTCTATATCAGCAAGCTTCCTAAAGATCACCCAGATGCACTTTTCCTAATGTGCGCATTTACAGTTTGTTTGGCTCTCACTCTGCTATTTCAGGGAAGAAACAGAAATTGCAGATTAAAATCTCGATTTGGAGTGAGGAATTTGAATGTTGAGATGTCTGAGAATCACGTAGCAGAGCAGGTTTCGGATTCTGGTCATGGTGTTGTGCACGACGAATCAAATGTGGATACCGAATCAAACATTGATACTTATAATCAAGATCAGCAGGGAGAGCGTGCTGATCTCAGAGGTCCTGAAGATGGAAAATCTACAGAGGATGCTGCCAGAGATGACATGTTTGTTGATTGCCCTGATGAGTTAAGCACATTTGATGGTAGGCAAAGGGAGGAAGACGCTGCAGCTGTGGAAAATGAAGATGACCGGTCGGAGGAAAATGAAGTTATGCAACAACAGCAGAGTCATTTTGATAAATTGGGCAATGGAGTGGGAGATGCTTACTCCTCAGGCCAGCTGGAGAAAGTTGTTGCCGAGAAGGAATGTATTTTGAAGGAATATCAGGAAGAAAGACAAACTGTTACTCAAGGTGTGCTTGATCTTCGATGTCAGCTGAAGACTCTCACTGGTCAACATAATGAAGCTCAAGTTGAAGATAGGGAAGCGACTGATGTTCCGTTGAGGGAGATGATAAAGGAATGTTTGGAGTCTGTGAAGACTGCCTCAGAAGAATGGTCAAACAGTGAAACTACTATAAATAATCTTCGCGAACATCTATCTACGAAGGACCGTGAGATAGAAGATCTTAATGCAAAGCTTGCCCAATTAATGGTATCTAATGAAAGTTTGCAAGTTTCATCCAAAGCTCAACTTGAAAAGGATCGTATTGTTGAGATTGTGATAGATAAGACGATATCCTCTCTTGCAACAGTTGTTACTCGAGAGCAAGTATTGGATGATTCTATTAGTGGGAAAATAGTTTATATTGAGGAAGGCACTATGCATGTAGTTGAAAAGTATAATCAGATGCTTTCTGAAATTTATCAACTTGGGCAATCTTTCTCTGAGGTAGGCTTGGAGACTAACGACCAGGAATACGGGAACATACTCGCTGATGCTCGTGGTGGGTTACTGGAGCTCAAAAGAAAGGAAACAGAATTGGTTGAAAAACTGGCTCATTTAGAAGATGAAAATCAGAAACTAGTTGATGAGCTTGACAAGGAAAAGGTGATGATAGGGACATTAAATACTGAACTTGGAAAACTGAAAATAGAACTCGAGCAGGAAAAGGCTAAATGTGCTAATACGAAAGAAAAGCTCAGTATGGCTGTGACAAAAGGAAAGGCATTGGTACAGCAGCGAGATTCATTAAAGAAGTCTCTGGCTGATAAATCCGGTGAGCTTGAGAAATGTTTGATTGAATTGCAAGAGAAGTCAGTTGCACTACAAGCTGCTGAACTTGCTAAGGAGGAGTTATCCCAAAGTAAAAATATGGTTGCATCCCTAGAGAACTCATTACTAGAAAAGAATGCAATTTTTGATCAAGTGGAAGAAATCTTGTCTCGGGCCAAACTTAATGAACCTGAAATGTTTGATATGCCAGAGAAACTAAGATGGCTTGTGGATGACAGAAACACTCTGAAGGAAGCCTTCCTAGAGCTATGCAAATTGAAGGAAGCTATATCTCTAGTGGACCTACCGGAGCCTGTTTCATCATCTGATTTGGAATCACAAATGAATTGGCTTGCAGATTCTTTGCTTAGTGCCCGGGGCAACATGCATACTCTACAGGAAGAAATTTCCACAATCAAGGAAGCATCCCGTGACTATGTTGATCAGCTTAGTGTTTCTCTTTTGCTGGCATTGCAGGAAAAAGATTACCTTCTGTCAGAATTAACTGACTTGAGGTTCAAATATGATGAGCTTGTTAACAAGAACCATCAGATTTCTTTGGAGAAGGATCAGATAGTGAATATGTTAGTCGATCTTTGTGGCCTGAACTTGGAAGATGAAGGGATTGATCAAATCTCTTCCAGCACCTCTATGATCATTGATTTATGCTTTAAAGTTATCAAAGGACAGGGTGGTCCCTTGTCTAGAGCATCCCATATTGATGCTGAGTTGTTTGAAAGGATTCAAAGTCTCTTGTATGTTAGAGATCAGGGATTAATACTCTATGAAGATATACTGGAAGAGGAGATGCTAATTAGATCAGATGAGAATAAGCTGTCAAATGAGTTGAAAGTGGCATCTGAGGAAATTATAGCACTGAAAGAGGAAAGGAGTTCTCTGCTGCAAGATCTTGAACGATCAGAGGAGAAGACTGCCATGCTTAGGGACAAGTTGTCCATGGCAGTTAAGAAAGGAAAGGGGCTGTTTCAAGATAGGGACAATCTAAAAGGTCTTGTAAATGAAAAGAAATCAGAGATTGAGCAGTTGAAGGCTGATTTGCAGAAGCAAGAATCTGCAGTTTCTGAATACAGGGATGAGATCAATAGATTGTCCAGTGATGTGGAAAGCATCCCGAAGCTGGAGGCTGATTTTCTGGAAATGAAAAGGGAGAAGAATCAGTTTGAACAGTTCTTAATGGAGAGCAATAACATGTTACAGAAAGTGATGGAGTGTATTGATGGTGTTGCTCTTCCAGTTGCTCCAGTTTTTGATGAACCAATAGAGAAGGTGAAGTGGCTTGCTGGTTATGTCAATGAATGCCAAGATGCTAAGGTACACATAGAACAAGAGTTGCAGCTAGTGAAGGAGAGTGCCAGTATACTTGAAATTCAATTAGCAGAAGCCCAAGCAACTGTAAAATCCCTTGAGCGGGAATTATCTTCTTCAGATGACAATGTTTCTCAACTTGCTGAAGAAAAAACAGAGTTAGAACATGGCAAAGAGAAAGTTGAGGAAGAGTTACAGAAAGTTAAAGAAAAAGTCGCTGAAGTTTGTAATACGACTAAGTCACTTGAAGATGCCTTATCACAAGCAGAAAAAGATATTTCTATTCTTTCCGAAGAGAAAGAGCAAGCTCAAGTTAGCAGAGTTGCTGCAGAGAGAGAGTTAGAGATTTTTAAAGATGAAGCAGCTATGCAAACAAGCAAACTGGCAGAGGCCAGCAAGACCATAAAGGATCTAGAAGATAAACTATCTCAGGTTGAGGGTAATGCCAATTTATTGACTGAAAAGTATAATGCTGATCAAGTTGTCAAAATTGACATGGAAAATGAATTGAAGAAGCTACAAGATGAAGCTTCAAATCATGCTAGTAAATTGGCAGGTGCCTCTGCAACTATAAAATCACTGGAGGATGCATTATCGAAGGCGCAAGATGATATTTCTGCCTTAGAAGATGCAAATAAAATTGCTAAACAGGAGATATCTTCACTTGGCTTTAAGTTAAATTCATGCATGGACGAGTTAGCTGGAAAGAATGGCAGCTTAGAAAACAAGTCCTTACAGCTCATTGGACTCCTTAATGATCTTCAGGGGCTCATGAAAGACACTACTCTATTTCCCAGAATTAAACAATGCTTTGAGAGCAAATGTGAGACACTGAAGAATATGACTCTCATTCTGAACAAAATAAGAGATAATGTTGCCATGACTGCAAAGGATTCAAAGGGGCAGCCTGTGATGGAGGAAAATCCACTTATGAGAGAAACATTCTTGGATGGCCCTGAAAATTTTGAAGTTGAACTGGACATTACAGAGATTGATGGTGCTGATATTGACACCATAATCTCATCATTTGGAAAGATTGTGAAAGGATTTCAGTCAAGAAACAAACACATTGCAGATAAGTTTCATGAATTTTCAGATTGTATGGATGAGTTTATTTCTCCTCTCCATGAAAAACTACTGGAAACAGAGACCATGTCAACGACTATTGTTGAGAACATGGAAATTATGAAAATAAAAGCAAATAGCATGGGAAAATTGAAAGAACAGGAAAATATTATTGCCACTTTAGAAAACAATGTCAGTGTATTGCTATCTGCATGCACGGATTCTACCATTGCACTTCAGAGTGAAGTTGACAAGAATGGGCAGCCAGGCTCCATTTCTGAGGTTGAACAGTTAAACCTGGAAGCAGGTGCACAAGTAGAGCATCATGAGAACAACAAATACACGGAAGCCACACATAAGTTGATGAATGCTTCTAGAAAAGCTCAAACTTTGATTAGACAGTTTGGATGTAGAAGTGAGCAAGTAGATGCAACAATTGAAGATTTGCAGAATAAATTGAAAGAAACAACAGTTGCTTTTGAATTAGTCACAGATGAGAGAGACTTGAATAAAAACAGAGTTTCAGAACTGGAGTCTGGTATTCAATCACTGCAAAGTGCTTGCAGTGAGCTTAAGGATAAGTTAGAGGGTTATCGTGCCTTAGAAGAAAAATTGGAGGACAAAGAGGCTGAGATTTCATCGATGCACAATGCTATGTTGGCAAAAGAAGAAGAAAACTTCCTCCTTCCAGCATCTCAAATGAGAGATCTCTTTGACAAGATAGATTGGATCAAAATCCCTATTGTAGAGTCTGAAGAAGATGATTTGGAGCCACATACTTCAGCCCCTATGAAAAAACTCTTTTATATTATTGATAGTGTTACTAGGTTGCATGATCAAATAAACTCTCTGTCTCATGATAAAGAAAAGCTGCAATCAATCcttgaaactaaggatcttgaaattaaggatctGAATGAGGAAGTCAAACAACTCGATAGAAATTGTGAAGACTCTAAAATGATCAAGAATGAATTGTCTGACCTCACCTATGTATTAGAAAAAATTATGGATATTTTGGGAGCTGGTGAATGGGTTGTAGATAGGAAATCTAAAGGTTTGAAGGAATTAATACCAGCACTGGAAAAGCATATCATTGCCATTCTTTCAGAATCTGAAAATTCAAAATCCAAGGCCCAGGAACTTGATATTAAGTTAGTTGGAAGTCAGAAGGTTATTGATGAATTAACGACCAAGGTTAAAGTACTTGAAGATTCACTCCAAGATAGGACTTCTCAGCCAGACATTGTCCAGGAAAGGAGCATATATGAAGCACCCTCATTACCTGCTGGGTCTGAGATAATTGAAGTTGAAGAGGGATCATCACTTGGCAAGAAAGCAATATCTCCTGTCCCATCGGCTGCTCATGTGCGGAATATGCGAAAAGGATCTAATGACCATCTTGCACTTGATATTAGTGTGGAGTCTGATAATCTGATTAACAGGGTAGATAAGGATGACGATAAAGGTCATGTATTCAAGTCTCTGAACACTTCTGGATTCGTACCAAAACAGGGAAAGCTCATTGCAGATCGTATTGATGGACTCTGGGTATCTGGTGGACGGGTTCTCATGAGTCGTCCTAGAGCAAGATTAGGACTAATTGGTTATTTGTTTATCATGCATATATGGCTACTGGGGACGATCTTGTAG 6135 0.3958 MAMIPYHLCRLPYQDSLKALEADIQHANALAAAIPRAKGGTLLQMKLVYNHLAPLFLLFLQWMDCSCAGFLHRYLNLFHILVYKVHNDGRSIMSTHGRKATIGDFYAVILPSLQRLHGSLEKLEVVEEEEGQSSIEGPSYGKKVIEGVKLTTNVDLQREDECGICLEPCTKMVLPGCCHAMCIKCYRKWNRKSESCPFCRGSLRRVNSEDLWVLTCNDDVVDAETVSKEDLLRFYLYISKLPKDHPDALFLMCAFTVCLALTLLFQGRNRNCRLKSRFGVRNLNVEMSENHVAEQVSDSGHGVVHDESNVDTESNIDTYNQDQQGERADLRGPEDGKSTEDAARDDMFVDCPDELSTFDGRQREEDAAAVENEDDRSEENEVMQQQQSHFDKLGNGVGDAYSSGQLEKVVAEKECILKEYQEERQTVTQGVLDLRCQLKTLTGQHNEAQVEDREATDVPLREMIKECLESVKTASEEWSNSETTINNLREHLSTKDREIEDLNAKLAQLMVSNESLQVSSKAQLEKDRIVEIVIDKTISSLATVVTREQVLDDSISGKIVYIEEGTMHVVEKYNQMLSEIYQLGQSFSEVGLETNDQEYGNILADARGGLLELKRKETELVEKLAHLEDENQKLVDELDKEKVMIGTLNTELGKLKIELEQEKAKCANTKEKLSMAVTKGKALVQQRDSLKKSLADKSGELEKCLIELQEKSVALQAAELAKEELSQSKNMVASLENSLLEKNAIFDQVEEILSRAKLNEPEMFDMPEKLRWLVDDRNTLKEAFLELCKLKEAISLVDLPEPVSSSDLESQMNWLADSLLSARGNMHTLQEEISTIKEASRDYVDQLSVSLLLALQEKDYLLSELTDLRFKYDELVNKNHQISLEKDQIVNMLVDLCGLNLEDEGIDQISSSTSMIIDLCFKVIKGQGGPLSRASHIDAELFERIQSLLYVRDQGLILYEDILEEEMLIRSDENKLSNELKVASEEIIALKEERSSLLQDLERSEEKTAMLRDKLSMAVKKGKGLFQDRDNLKGLVNEKKSEIEQLKADLQKQESAVSEYRDEINRLSSDVESIPKLEADFLEMKREKNQFEQFLMESNNMLQKVMECIDGVALPVAPVFDEPIEKVKWLAGYVNECQDAKVHIEQELQLVKESASILEIQLAEAQATVKSLERELSSSDDNVSQLAEEKTELEHGKEKVEEELQKVKEKVAEVCNTTKSLEDALSQAEKDISILSEEKEQAQVSRVAAERELEIFKDEAAMQTSKLAEASKTIKDLEDKLSQVEGNANLLTEKYNADQVVKIDMENELKKLQDEASNHASKLAGASATIKSLEDALSKAQDDISALEDANKIAKQEISSLGFKLNSCMDELAGKNGSLENKSLQLIGLLNDLQGLMKDTTLFPRIKQCFESKCETLKNMTLILNKIRDNVAMTAKDSKGQPVMEENPLMRETFLDGPENFEVELDITEIDGADIDTIISSFGKIVKGFQSRNKHIADKFHEFSDCMDEFISPLHEKLLETETMSTTIVENMEIMKIKANSMGKLKEQENIIATLENNVSVLLSACTDSTIALQSEVDKNGQPGSISEVEQLNLEAGAQVEHHENNKYTEATHKLMNASRKAQTLIRQFGCRSEQVDATIEDLQNKLKETTVAFELVTDERDLNKNRVSELESGIQSLQSACSELKDKLEGYRALEEKLEDKEAEISSMHNAMLAKEEENFLLPASQMRDLFDKIDWIKIPIVESEEDDLEPHTSAPMKKLFYIIDSVTRLHDQINSLSHDKEKLQSILETKDLEIKDLNEEVKQLDRNCEDSKMIKNELSDLTYVLEKIMDILGAGEWVVDRKSKGLKELIPALEKHIIAILSESENSKSKAQELDIKLVGSQKVIDELTTKVKVLEDSLQDRTSQPDIVQERSIYEAPSLPAGSEIIEVEEGSSLGKKAISPVPSAAHVRNMRKGSNDHLALDISVESDNLINRVDKDDDKGHVFKSLNTSGFVPKQGKLIADRIDGLWVSGGRVLMSRPRARLGLIGYLFIMHIWLLGTIL 2044
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02476 2044 Coils Coil 1887 1907 - -
Gma11g02476 2044 Coils Coil 1633 1660 - -
Gma11g02476 2044 Coils Coil 1029 1070 - -
Gma11g02476 2044 Coils Coil 1668 1719 - -
Gma11g02476 2044 MobiDBLite consensus disorder prediction 293 345 - -
Gma11g02476 2044 PANTHER BNAA09G28150D PROTEIN 1242 1294 - -
Gma11g02476 2044 PANTHER BNAA09G28150D PROTEIN 1355 2044 - -
Gma11g02476 2044 PANTHER BNAA09G28150D PROTEIN 329 1197 - -
Gma11g02476 2044 Coils Coil 708 738 - -
Gma11g02476 2044 Coils Coil 1148 1357 - -
Gma11g02476 2044 SUPERFAMILY Tropomyosin 1127 1363 - -
Gma11g02476 2044 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 143 210 IPR013083 -
Gma11g02476 2044 PANTHER - 1242 1294 - -
Gma11g02476 2044 PANTHER - 1355 2044 - -
Gma11g02476 2044 PANTHER - 329 1197 - -
Gma11g02476 2044 Coils Coil 1538 1565 - -
Gma11g02476 2044 PANTHER - 1299 1351 - -
Gma11g02476 2044 Coils Coil 485 519 - -
Gma11g02476 2044 PANTHER - 1197 1246 - -
Gma11g02476 2044 Gene3D - 1265 1432 - -
Gma11g02476 2044 Coils Coil 403 423 - -
Gma11g02476 2044 ProSitePatterns Zinc finger RING-type signature. 177 186 IPR017907 -
Gma11g02476 2044 PANTHER BNAA09G28150D PROTEIN 1197 1246 - -
Gma11g02476 2044 Coils Coil 973 1007 - -
Gma11g02476 2044 SMART ring_2 162 199 IPR001841 -
Gma11g02476 2044 Coils Coil 610 672 - -
Gma11g02476 2044 ProSiteProfiles Zinc finger RING-type profile. 162 200 IPR001841 -
Gma11g02476 2044 SUPERFAMILY RING/U-box 151 204 - -
Gma11g02476 2044 Coils Coil 1782 1816 - -
Gma11g02476 2044 Pfam Ring finger domain 160 200 IPR001841 -
Gma11g02476 2044 MobiDBLite consensus disorder prediction 1178 1198 - -
Gma11g02476 2044 PANTHER BNAA09G28150D PROTEIN 1299 1351 - -
Gma11g02476 2044 MobiDBLite consensus disorder prediction 327 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02476 Gma-Chr11 40010719 40021486 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02476 - - gmx:100799016 3313.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00102 18 805203 817700 Gma11g02476 11 40010719 40021486 GST