Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00090 ATGGCATCAGATAAGAAGATTAGGATCGGCATCAACGGATTTGGAAGGATTGGCCGTTTGGTGGCCAGGGTTGCCCTTCAAAGGAATGATGTTGAACTTGTTGCTGTCAACGATCCTTTCATCACCACTGATTACATGACATACATGTTCAAGTACGACACCGTTCATGGCCAGTGGAAGCATTTTGATGTGAAGGTGAAGGACTCTAAGACCCTTCTCTTTGGTGAGAAGCCCGTCACCGTTTTTGGAATCAGGAACCCTGAGGAAATTCCATGGGGTGAGGTTGGTGCTGATTATGTTGTTGAGTCAACTGGTGTATTCACTGACAAGGACAAGGCTGCTGCTCACTTGAAGGGTGGTGCCAAGAaggttgtcatctctgccccaagcaaagatgcacccatgtttgttgttggtgttaacgagaaggagtacaagccagagcttgacattgtttccaatgctagctgcactaccaattgtcttgctcccctcgccaagGTTATCAATGACCGATTTGGAATTGTGGAGGGTCTTATGACCACTGTTCATGCCATCACAGCTACTCAGAAGACTGTTGATGGTCCATCAAACAAGGACTGGAGGGGTGGAAGAGCTGCTTCCTTCAATATAATTCCCAGCAGCACTGGAGCTGCTAAGGCTGTAGGAAAAGTTCTTCCAGCACTGAATGGTAAATTGACTGGCATGTCCTTCCGAGTCCCCACTGTAGATGTTTCAGTTGTTGACCTCACTGTCAGGCTAGAGAAGCCAGCAACCTATGAGCAAATCAAATCTGCTATCAAGGAGGAATCAGAGGGCAAATTGAAGGGTATTTTGGGTTACACCGAAGATGATGTTGTGTCTACTGATTTTGTTGGTGATAACAGGTCTAGCATATTTGACGCCAAGGCCGGAATTTCTTTGAATGACAACTTTGTAAAACTTGTTTCCTGGTATGACAACGAATGGGGTTACAGTTCCCGTGTGATTGATTTGATTGTCCACATTGCATCCGTGGCTTAA 1023 0.3959 MASDKKIRIGINGFGRIGRLVARVALQRNDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHFDVKVKDSKTLLFGEKPVTVFGIRNPEEIPWGEVGADYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAPMFVVGVNEKEYKPELDIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHAITATQKTVDGPSNKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLEKPATYEQIKSAIKEESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGISLNDNFVKLVSWYDNEWGYSSRVIDLIVHIASVA 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00090 340 PANTHER GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE 3 337 - -
Gma18g00090 340 Gene3D Dihydrodipicolinate Reductase; domain 2 156 321 - -
Gma18g00090 340 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 116 129 IPR020831 GO:0016620
Gma18g00090 340 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 151 169 IPR020831 GO:0016620
Gma18g00090 340 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 178 194 IPR020831 GO:0016620
Gma18g00090 340 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 235 252 IPR020831 GO:0016620
Gma18g00090 340 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 275 290 IPR020831 GO:0016620
Gma18g00090 340 TIGRFAM GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 8 331 IPR006424 GO:0006006|GO:0016620|GO:0050661|GO:0051287
Gma18g00090 340 Gene3D - 7 334 - -
Gma18g00090 340 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 173 IPR036291 -
Gma18g00090 340 SMART gp_dh_n_7 7 157 IPR020828 GO:0051287
Gma18g00090 340 Pfam Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 7 110 IPR020828 GO:0051287
Gma18g00090 340 ProSitePatterns Glyceraldehyde 3-phosphate dehydrogenase active site. 155 162 IPR020830 GO:0016620
Gma18g00090 340 Pfam Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 162 319 IPR020829 GO:0016620
Gma18g00090 340 PANTHER GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE 3 337 IPR020831 GO:0016620
Gma18g00090 340 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 156 319 - -
Gma18g00090 340 PIRSF GAPDH 5 340 IPR020831 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00090 Gma-Chr18 711142 714001 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00090 K00134 - gmx:100782924 653.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00090 18 711142 714001 Gma18g00090 18 711142 714001 ECH
Gma18g00090 18 711142 714001 Gma06g01537 06 14821820 14824297 ECH
Gma18g00090 18 711142 714001 Gma04g01874 04 48967243 48970054 ECH
Gma18g00090 18 711142 714001 Gma11g02490 11 40126571 40129249 GST