Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00088 ATGGGCCACTCTGAGGAAAACAGTGATGTTGCTGCCAGGCAGAAGGCAATCGATGATTGGCTTCCTGTCACTGGTTCCCGAAATGCCAAATGGTGGTCTTCAGCCTTCCACAATCTCACAGCCATGGTTGGTGCAGGTGTCCTCAGCCTTCCATTTGCCATGTCAAATATGGGCTGGGGCCCCGGTGCTACCGTGCTTATCTTGTCATGGGTTATCACCCTCTACACCCTATGGCAAATGGTTGAGATGCACGAAATGGTGCCAGGGAAAAGATTTGATAGGTACCATGAGTTGGGCCAGCATGCCTTCGGAGACAAGCTAGGTCTCTGGATTGTGGTTCCCCAACAAGTTGTTGTTGAAGTTGGCACGTGCATTGTCTATATGGTTACTGGTGGCAAGTCATTGAAGAAAGTTCATGATACCCTTTGTCCCGATTGCAAAGATATTAAGACCTCGTATTGGATTGTTATCTTCGCTTCTGTGAACATCGTTCTTGCGCAATGCCCTAACTTGAACTCCATCTCTGCTATCTCTTTTGTTGCAGCTGCCATGTCTTTGATATACTCAACCATCGCTTGGGGTGCTTCTATAAACAAGGGGATTGAAGCAAATGTGGATTATGGCTCCAGAGCCACTAGCTCTGCTGATGCTGTATTCAACTTCTTTTCTGCCTTGGGTGATGTAGCATTTGCCTACGCAGGTCACAATGTGGTTTTGGAAATTCAAGCAACCATGCCTTCATCCGAAGATACACCTTCCAAGAAACCCATGTGGAGAGGAGTTATTTTGGCATACATAGGAGTTGCATTCTGCTACTTACCTGTTGCCTTCATTGGATACTATATGTTTGGAAACTCAGTTGATGATAACATCCTCATCACACTAGAACGCCCCGCTTGGCTCATTGCCGCTGCTAACCTCTTTGTCTTTGTCCACGTTGTTGGAGGCTACCAGGAGACACAGGTGTTTGCCATGCCAGTGTTTGATATGATCGAAACCTACATGGTTACGAAATTAAATTTCCCACCTTCTACTGCACTCCGAGTAACAACTCGCACTATATATGTTGCATTGACAATGTTAATTGGCATATGTATCCCGTTCTTTGGCTCTCTTCTTGGATTTCTTGGAGGCTTTGCGTTTGCCCCGACATCATATTTTTTGCCCTGTATCATATGGCTTAAGCTTAAAAAGCCCAAGAAATTTGGCTTGTCTTGGACGATTAACTGGATCTGCATTATTCTTGGGGTAATGTTGATGATAGTATCTCCAATTGGTGCTCTAAGGAATATCATATTATCGGCCAAAAACTACGAGTTCTTCTCATAA 1329 0.4492 MGHSEENSDVAARQKAIDDWLPVTGSRNAKWWSSAFHNLTAMVGAGVLSLPFAMSNMGWGPGATVLILSWVITLYTLWQMVEMHEMVPGKRFDRYHELGQHAFGDKLGLWIVVPQQVVVEVGTCIVYMVTGGKSLKKVHDTLCPDCKDIKTSYWIVIFASVNIVLAQCPNLNSISAISFVAAAMSLIYSTIAWGASINKGIEANVDYGSRATSSADAVFNFFSALGDVAFAYAGHNVVLEIQATMPSSEDTPSKKPMWRGVILAYIGVAFCYLPVAFIGYYMFGNSVDDNILITLERPAWLIAAANLFVFVHVVGGYQETQVFAMPVFDMIETYMVTKLNFPPSTALRVTTRTIYVALTMLIGICIPFFGSLLGFLGGFAFAPTSYFLPCIIWLKLKKPKKFGLSWTINWICIILGVMLMIVSPIGALRNIILSAKNYEFFS 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00088 442 Pfam Transmembrane amino acid transporter protein 28 427 IPR013057 -
Gma18g00088 442 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 8 437 - -
Gma18g00088 442 PANTHER OS05G0424000 PROTEIN-RELATED 8 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00088 Gma-Chr18 697217 699897 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00088 1 442 Organic Solute Cotransporters AT1G24400 70.946 0.0 652
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00088 - - gmx:100786115 875.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00088 18 697217 699897 Gma18g00088 18 697217 699897 ECH
Gma18g00088 18 697217 699897 Gma11g02492 11 40139212 40142143 GST
Gma18g00088 18 697217 699897 Gma08g00946 08 7974164 7976367 PCT
Gma08g00946 08 7974164 7976367 Gma18g00088 18 697217 699897 PCT