Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00946 ATGGAAACTGAAACTGAAAATGCTAATGATGCTGATATAAAGGCCATTAATGATTGGCTTCCTGTCACTGCCTCCCGAAATGCCAAATGGTGGTACTCTGCCTTCCACAACATCACTGCCATGGTTGGTGCTGGTGTCCTCACCCTTCCTTATGCCATGTCTATGATGGGCTGGGGTCCGGGGACAGTTATACTGCTCTTGTCATGGATGATCACGTTGTTTACCCTATGGCAAATGGTTGAGATGCACGAAATGGTACCTGGTGTGAGATTCGATAGGTATCATGAATTGGGGCAGCATGCCTTTGGAGAGAAGTTGGGTCTCTACATTGTGATTCCTCAACAACTACTTGTTCAGGTTGGCACATGCATTGTATATATGGTCACAGGAGGAACATCGCTAAAGAAGTTTCATGACACGGTTTGCCCCTCGTGTCAAAACATTAGGACCTCCTATTGGATTGCTATCTTTGGTTTTGTAAACTTCGTCCTCTCTTTGTGCCCCAACTTCAACTCTATTTCTGCTGTCTCTTTTGCCGCAGCAGTCATGTCTATCGCTTACTCAACCATTGCTTGGGTGGCTTCCATTGGCAAGGGAAAACTACCAGATGTGGACTATGGCTACAAAGCCCACAGCACTGCCGATGGTGTATTCAACTTCATGTTGGCCTTGGGAGAGGTGGCATTCTCCTATGCAGGTCACAATGTGGTTTTGGAAATCCAAGCAACAATACCTTCTACTCCTGAGAAACCTTCCAAGAAAGCCATGTGGAAAGGAGTTATATTTGCCTATTTAGGAGTTGCCTTTTGCTATCTCCCTGTGGCCTTCATTGGATATTATATATTTGGCAACTCTGTCCAGGATAATATCCTCATCACACTAGAAAAACCAACTTGGCTCATTGCTGCAGCCAACATGTTTGTTATTGTCCATGTTATTGGAGGCTATCAGGTATTCTCAATGCCGGTGTTTGACATCATCGAAACCTTTTTGGTGAAGCATTTAAAGTTTTCTCCTTGTTTTACACTCCGCTTTGTTGCTCGCACTGTATTTGTAGCAATGTCAATGTTAATTGCCATATGCATCCCGTTCTTCGGTTCTCTTCTTGGATTTCTAGGAGGATTTGCCTTTGCCCCAACATCATACTTTCTACCCTGTATCATCTGGCTTAAACTCTACAAACCAAAGAGATTTAGTTTGTCTTGGATAGTCAATTGGACATGCATTGTGCTTGGGATGCTATTGATGATACTAGCTCCAATTGGTTCGTTGAGAAAAATCATTGTTTCAGCGGCGAATTACAAGTTCTTTTCGTGA 1317 0.4351 METETENANDADIKAINDWLPVTASRNAKWWYSAFHNITAMVGAGVLTLPYAMSMMGWGPGTVILLLSWMITLFTLWQMVEMHEMVPGVRFDRYHELGQHAFGEKLGLYIVIPQQLLVQVGTCIVYMVTGGTSLKKFHDTVCPSCQNIRTSYWIAIFGFVNFVLSLCPNFNSISAVSFAAAVMSIAYSTIAWVASIGKGKLPDVDYGYKAHSTADGVFNFMLALGEVAFSYAGHNVVLEIQATIPSTPEKPSKKAMWKGVIFAYLGVAFCYLPVAFIGYYIFGNSVQDNILITLEKPTWLIAAANMFVIVHVIGGYQVFSMPVFDIIETFLVKHLKFSPCFTLRFVARTVFVAMSMLIAICIPFFGSLLGFLGGFAFAPTSYFLPCIIWLKLYKPKRFSLSWIVNWTCIVLGMLLMILAPIGSLRKIIVSAANYKFFS 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00946 438 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 7 433 - -
Gma08g00946 438 Pfam Transmembrane amino acid transporter protein 27 422 IPR013057 -
Gma08g00946 438 Gene3D Amino acid/polyamine transporter I 23 436 - -
Gma08g00946 438 PANTHER OS05G0424000 PROTEIN-RELATED 7 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00946 Gma-Chr8 7974164 7976367 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00946 2 438 Organic Solute Cotransporters AT1G24400 69.794 0.0 626
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00946 - - gmx:100809608 801.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00088 18 697217 699897 Gma08g00946 08 7974164 7976367 PCT
Gma11g02492 11 40139212 40142143 Gma08g00946 08 7974164 7976367 PCT
Gma08g00946 08 7974164 7976367 Gma18g00088 18 697217 699897 PCT
Gma08g00946 08 7974164 7976367 Gma11g02492 11 40139212 40142143 PCT