Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00056 ATGAAGAGAGTGGAGTTTATGGGGCTGGGGCTGTTAGTGGTGGTGATGATGGGATGTTGTGGGTCTGCGACTGCTGCGGATGACTTGGCAACCAAGTGTTCAGCGGTGATTCAGAAGGTAATACCGTGTCTGAACTTCGCGACGGGGAAGGAAGAAATGCCCAAAAAGGAATGTTGCGACGCCGCCACGGCCATAAAGGAGAGCAACCCAGAGTGCTTGTGCTACATCATTCAAGAGACCCACAAGGGTAGCCCACAGGTCAAAAGCTTGGGCATTCAAGAGGCCAAGCTGCTTCAGCTCCCTTCTGTTTGCAACGTCAAAAACGCCAGCATCACCAACTGTCCTAAGCTTTTGGGTCTATCTCCAAGTTCCCCCGATGCTGCTATCTTCACATCAAATTCTTCGAAGACAACACCTTCAGCACCTACAACAACAAACTCGCAAACCACGACCCCGCAGAGCCAAAACGCTTCTCATGGAAGCATGGTTCAACCTAGTAGTACCGTTACCTATGTGATGGTGATGGCTTTGGCCATTGTTCTGGTTGCAGTTCCAACCGAAACTGTGAGCATTTATACATGA 582 0.5 MKRVEFMGLGLLVVVMMGCCGSATAADDLATKCSAVIQKVIPCLNFATGKEEMPKKECCDAATAIKESNPECLCYIIQETHKGSPQVKSLGIQEAKLLQLPSVCNVKNASITNCPKLLGLSPSSPDAAIFTSNSSKTTPSAPTTTNSQTTTPQSQNASHGSMVQPSSTVTYVMVMALAIVLVAVPTETVSIYT 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00056 193 Gene3D - 29 111 IPR036312 -
Gma18g00056 193 Pfam Probable lipid transfer 23 114 IPR016140 -
Gma18g00056 193 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 12 186 IPR043325 -
Gma18g00056 193 PANTHER NON-SPECIFIC LIPID TRANSFER PROTEIN GPI-ANCHORED 1 12 186 - -
Gma18g00056 193 MobiDBLite consensus disorder prediction 129 162 - -
Gma18g00056 193 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 31 114 IPR036312 -
Gma18g00056 193 SMART aai_6 33 114 IPR016140 -
Gma18g00056 193 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Gma18g00056 193 CDD AAI_LTSS 42 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00056 Gma-Chr18 457848 460079 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00056 32 184 Acyl Lipid Metabolism Gene Families AT1G27950 50.980 3.31e-46 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00056 - - gmx:100305718 335.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00056 18 457848 460079 Gma18g00056 18 457848 460079 ECH
Gma18g00056 18 457848 460079 Gma11g02524 11 40369296 40372407 GST
Gma18g00056 18 457848 460079 Gma05g01487 05 36759821 36762988 PCT
Gma05g01487 05 36759821 36762988 Gma18g00056 18 457848 460079 PCT