Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01487 ATGAAGTTGAAGCAGCAGAAAATGAGAGTAGTAGTAGGGTCAGTGTGGCTGTGCCTCTTTCTGTTGGCTGTCGGGGAGTCGGAGGGAGCGGATTTGGCGGCGAAGTGCAACCTGCTGGTTCAGAAAGTGCTGCCGTGCCTGAACTTCGCGACGGGGCAGGCGGCGGTTCCGACCAAGGACTGCTGCGAGGCGACGTCGGAGATAAAGAAGAGCGACCCGGAGTGCCTGTGCTTTGCGATCCAACAGACTCACAAGGGTAGTCCGGAGGTGAAAAATATGGGCATACAAGAGGCTAGGCTGCTTCAGCTACCTTCTGCTTGTAACTTGAAGAATGCCAGCACCACCAACTGTCCTAAGCTTCTGGGTCTATCTCCAAACTCCGCTGACGCTGCTATCTTCAGAAATGGTTCGTTGAAAACGAATTCAGCTTCAACAGTCTCAGAAGAAATCCACAAGGGCTCTTATGGAAACATGCTTAGACCTGTTCTCGTTGCAGACCTAATAGCTGTTCTCCTCGTCATGATTCCAATAGGTTCGTGA 540 0.5185 MKLKQQKMRVVVGSVWLCLFLLAVGESEGADLAAKCNLLVQKVLPCLNFATGQAAVPTKDCCEATSEIKKSDPECLCFAIQQTHKGSPEVKNMGIQEARLLQLPSACNLKNASTTNCPKLLGLSPNSADAAIFRNGSLKTNSASTVSEEIHKGSYGNMLRPVLVADLIAVLLVMIPIGS 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01487 179 Gene3D - 33 115 IPR036312 -
Gma05g01487 179 CDD AAI_LTSS 43 109 - -
Gma05g01487 179 SMART aai_6 36 117 IPR016140 -
Gma05g01487 179 Pfam Probable lipid transfer 27 117 IPR016140 -
Gma05g01487 179 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 10 151 IPR043325 -
Gma05g01487 179 PANTHER NON-SPECIFIC LIPID TRANSFER PROTEIN GPI-ANCHORED 1 10 151 - -
Gma05g01487 179 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 34 117 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01487 Gma-Chr5 36759821 36762988 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01487 35 140 Acyl Lipid Metabolism Gene Families AT1G27950 55.660 5.77e-41 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01487 - - gmx:100799403 350.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00056 18 457848 460079 Gma05g01487 05 36759821 36762988 PCT
Gma11g02524 11 40369296 40372407 Gma05g01487 05 36759821 36762988 PCT
Gma05g01487 05 36759821 36762988 Gma18g00056 18 457848 460079 PCT
Gma05g01487 05 36759821 36762988 Gma11g02524 11 40369296 40372407 PCT