Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00042 ATGTATCGCTCATATCCATCCAATGACCAATCTAATCCGAACGAATGCTGTGGAGGAAGCGACCTTAACTTAGTTGAGTTGAAGTTGAAAGATAACAAACAACAAACAAGAATGCCCATCTTCTCTGCAACGTTGGGCTCCTTCACTTCCATCTCCTCCTCCTTCCTCTCACAGTCACACCTTTCTCCTTTCGTGAAGACACCTTGCCAATGGCAGCATCACTATCACACTGCTAAAGTCTTGGTCTCTGCCTCTGGCAATACCCAAATTGACCAAAATCCCGACTCTGGACTTCTTCAACGCCCTACTCCTCCAGACCCACTCGATGACGCTCGTCAGGCTCGGAGATCGTCAGATTGGAAGGCTGCAAAGACATATCAAGATAGTAAAGTCATTTATAATGGTAGGGTTGAAGGTTTTAATTCTGGAGGCCTGCTGGTTCGGTTTTATTCTGTTATGGGCTTTCTCCCATTCCCACAATTGAGTCCAGTGCATGCTTCTAAAGAACCAGAGAAATCTATCCAAGAAATTGCACAAGGCTTAATTGGTTCAATCATGTCGGTGAAGGTAATTCTAGCAGATGAGGATAACAAGAAATTGATCTTCTCTGAAAAGGAAGCTGCCTGGTCCAAATATTCAAAACAGGTCAATGTAGGGGACATTTTTGAAGTAAGAGTTGGTTATGTTGAGGACTATGGTGCTTTTGTTCATTTGCGCTTCCCTGACGGTCTTTATCACCTTACTGGACTAATACACGTCTCAGAAGTGTCATGGGATCTAATTCAGGATGTCAGAGATATCTTAAAAGTAGGTGATGAAGTGAGGGCCAAAGTTGTTGGTATTGATTGGGGAAAATCAAGGATTAACCTATCAATTAGACAGCTAGAAGAAGATCCACTCTTAGAAACTCTGGACAAAGTAATACCTCAGGATGGTTCAGCTGATCCTGATTCTATGAGTGGTGGTGATAGCGGTAGCATTGAGCCTCTTCCAGGGCTTGAAACAATCCTTGAAGAGCTACTACAGGAAGATGGAATATATGACGTAAGAATCAGCCGTCAAGGGTTTGAAAAAAGAGTGGTCTCGCAAGACTTGCAGCTTTGGCTTTCTAATGCACCTCCCACGAACCAAAGGTTTACTCTACTTGCCCGGGCTGGAAGACAGGTGCAGGAGATACATCTCACTACATCCCTTGATCAGGAAGGTATCAGGAGGGCATTACAACGAGTATTGGAGCGTGTCCCCTGA 1248 0.4423 MYRSYPSNDQSNPNECCGGSDLNLVELKLKDNKQQTRMPIFSATLGSFTSISSSFLSQSHLSPFVKTPCQWQHHYHTAKVLVSASGNTQIDQNPDSGLLQRPTPPDPLDDARQARRSSDWKAAKTYQDSKVIYNGRVEGFNSGGLLVRFYSVMGFLPFPQLSPVHASKEPEKSIQEIAQGLIGSIMSVKVILADEDNKKLIFSEKEAAWSKYSKQVNVGDIFEVRVGYVEDYGAFVHLRFPDGLYHLTGLIHVSEVSWDLIQDVRDILKVGDEVRAKVVGIDWGKSRINLSIRQLEEDPLLETLDKVIPQDGSADPDSMSGGDSGSIEPLPGLETILEELLQEDGIYDVRISRQGFEKRVVSQDLQLWLSNAPPTNQRFTLLARAGRQVQEIHLTTSLDQEGIRRALQRVLERVP 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00042 415 PANTHER OS03G0844900 PROTEIN 38 415 - -
Gma18g00042 415 SUPERFAMILY Nucleic acid-binding proteins 131 205 IPR012340 -
Gma18g00042 415 Gene3D - 120 210 IPR012340 -
Gma18g00042 415 Gene3D - 211 305 IPR012340 -
Gma18g00042 415 MobiDBLite consensus disorder prediction 91 119 - -
Gma18g00042 415 ProSiteProfiles S1 domain profile. 219 293 IPR003029 GO:0003676
Gma18g00042 415 SUPERFAMILY Nucleic acid-binding proteins 205 298 IPR012340 -
Gma18g00042 415 SMART S1_6 217 293 IPR022967 -
Gma18g00042 415 SMART S1_6 128 205 IPR022967 -
Gma18g00042 415 Pfam S1 RNA binding domain 216 293 IPR003029 GO:0003676
Gma18g00042 415 ProSiteProfiles S1 domain profile. 130 205 IPR003029 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00042 Gma-Chr18 346548 350494 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00042 - - gmx:100798303 713.761
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00042 18 346548 350494 Gma11g02540 11 40487443 40491487 GST