Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02540 ATGCCCATATTCTCTGCAAGCTTGGGCTCCTTCACTTCCATCTCCTTCCTCTCAACTTCACAATCACAATCACACCTTTCTCCTTTCAAGTTAACTGTGAAGACACCTTGGCAATGGCAGCATCATCACTATCTCACTTCTAAAGTGTTGGTCTCTGCCTCTGGCAACACCCAAATTCCTAATACTGAACTTCTTCAACGCCCTACTCCTCCAGACCCTCTCGATGACGCTCGTCAGGCTCGGAGATCGTCAGATTGGAAGGCTGCAAAGACATATCAAGATAGTAAACTCATCTATAATGGTAGAGTGGAAGGTTTTAATTCTGGAGGCCTGCTGGTTCGGTTTTATTCTATTATGGGCTTTCTCCCATTCCCCCAATTGAGTCCAGTGCATGCTTCTAAAGAACCAGAGAAATCTATACAAGAAATTGCACAAGGCTTAATTGGTTCAATCATGTCGGTGAAGGTAATTCTAGCAGATGAGGATAACAAGAAATTGATCTTATCTGAAAAGGAAGCTGCCTGGTCCAAATTTTCAAAACAGGTTAATGTAGGGGACATTTTTGAAGTAAGAGTTGGTTATGTTGAGGACTATGGTGCTTTTGTTCATTTGCGCTTCCCTGACGGTCTTTATCGCCTTACTGGACTAATACACGTGTCAGAAGTGTCATGGGATCTAATTCAGGATGTCAGAAATATCTTAAAAGTGGGCGATGAAGTGAGGGCCAAAGTTGTCGGTATTGATTGGGGAAAATCAAGGATTAACCTATCAATTAGACAGCTAGAAGAAGATCCACTCTTAGAAACTCTGGACAAAGTAATACCTCAGGATGGTTCAGCTGATCCTGATTCCATGAGCGGTGGTGATAGCGGTAGCATTGAGCCTCTTCCAGGACTTGAAACAATCCTTGAAGAGCTGCTACAGGAAGATGGAATATATGACGTAAGAATCAGCCGTCAAGGGTTTGAAAAACGAGTGGTCTCGCAAGACTTGCAGCTTTGGCTTTCTAATGCACCTCCCACGAACCAAAGGTTTACTCTTCTTGCTCGGGCTGGAAGACAGGTGCAGGAGATACACCTGACTACATCCCTTGATCAGGAAGGTATCAAGAAGGCATTACAACGAGTACTGGAGCGTGTCCCCTGA 1146 0.4415 MPIFSASLGSFTSISFLSTSQSQSHLSPFKLTVKTPWQWQHHHYLTSKVLVSASGNTQIPNTELLQRPTPPDPLDDARQARRSSDWKAAKTYQDSKLIYNGRVEGFNSGGLLVRFYSIMGFLPFPQLSPVHASKEPEKSIQEIAQGLIGSIMSVKVILADEDNKKLILSEKEAAWSKFSKQVNVGDIFEVRVGYVEDYGAFVHLRFPDGLYRLTGLIHVSEVSWDLIQDVRNILKVGDEVRAKVVGIDWGKSRINLSIRQLEEDPLLETLDKVIPQDGSADPDSMSGGDSGSIEPLPGLETILEELLQEDGIYDVRISRQGFEKRVVSQDLQLWLSNAPPTNQRFTLLARAGRQVQEIHLTTSLDQEGIKKALQRVLERVP 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02540 381 ProSiteProfiles S1 domain profile. 185 259 IPR003029 GO:0003676
Gma11g02540 381 SUPERFAMILY Nucleic acid-binding proteins 98 171 IPR012340 -
Gma11g02540 381 SMART S1_6 183 259 IPR022967 -
Gma11g02540 381 SMART S1_6 94 171 IPR022967 -
Gma11g02540 381 SUPERFAMILY Nucleic acid-binding proteins 172 264 IPR012340 -
Gma11g02540 381 PANTHER OS03G0844900 PROTEIN 2 381 - -
Gma11g02540 381 MobiDBLite consensus disorder prediction 60 87 - -
Gma11g02540 381 Pfam S1 RNA binding domain 182 259 IPR003029 GO:0003676
Gma11g02540 381 ProSiteProfiles S1 domain profile. 96 171 IPR003029 GO:0003676
Gma11g02540 381 Gene3D - 178 271 IPR012340 -
Gma11g02540 381 Gene3D - 86 177 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02540 Gma-Chr11 40487443 40491487 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02540 - - gmx:100786308 701.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00042 18 346548 350494 Gma11g02540 11 40487443 40491487 GST