Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00013 ATGAGAAGGAAATCTAAAAATGAGGTGGTTATTGTGTTCGAATTAGGTGATGATGTAGAATTTTCAGGGATTGGAGGGTTCATTCCATTTCCTGCACCATCCCCGCCATGGATTGGAGTTGTTGTGGTAGGTGCTGCCACATTCGGCATCGCTTTGCTTATGGTGGTGGAGAAGGATCACTTACGCCCCAAGCTACTACGTACAAACAGACGAACACCAATTACAGTTTCCGGGTTGTTCAATAAGAGAATGAGTGCTGAGATTGATTCAACTTGTGCTCCTGAACCTCACAAAATGTCTGGCCAAAAGCTCTCTATATTTTCTGCCAAATCTGGATTTGTCATCCCTAAAAACAAATTGTCAGGGTCACTGGTCCCTATTTTCCGAGGGGCTAAAAAGCATGGGGTCACTGTTGGTGCCACCAATGAAGAAAGTTCAAAACAAATTGAGAGGAAATCAAAATGGGGACCTGATCTCACACAAGATGCAGCTGTCAGGAGGGGAAAAGTTTTAGCTTTGCAGATTCGAGTGGACCAAATTACAAAGCAGTTGGAATCAGAAAAACTGGAAGTTGGGGACACTCAGAACTTGAATCCAGATCAAAGCAAATCTGGCCCTCGAATTACCAGCAAGAAGTCAGAAATGCTCGAACTTGAAAAGCGGGAAGCAATAGGTGAAATACTAAAATTAGATCCCAGTTACAAGCCTCCACGTGGTTTTAAACCATTGTTAAAAGAAGCCAGCATTCCTTTGCCTGTCCAAGAATATCCTGGGTACAATTTTGTTGGTCTAATATATGGGCTTGAAGGTGATAATCAAAAACAACTTGAAAAGGAAACTGGTGCAAAGATAAAAATTCATGGAATCAAAGCAGACACAGGAGAGAAAGGTGAAATTAAACCTGGAACTGATATCCAGTGCAATTACAAAGAGATGCATGTTAACCTATCAGCTGATAGTTTTGAAAAAGTGGATGCTGCAATGTCAATCATTGAACTGCTAGTTACCTCTGTAATTGGGAATTTAGCTGCTGGTTCTACTCCCTCTATATCAGTTTCTAGGTACAGCACTAATGTTCTGAGTCAAAGCCACGAATGCCCCCCTTCTCATGCAGATTCTCTATCTCTGGAAAACCAGGCTGTGTTGCAACCAGTAGCTGTTACACAAATGCATGGTGATAACTTCCAATACTCTAGTCCATGGTTTTCAGTGGTTCCATCTCATTCCCCTGTGTTTGCTTCGTCTGGCAGTGTAGCCCTCCCAAATCCATTAGGTCTTGCTAGAACTCCCCATTTTCCATCACACACTTCAAACATGACTTCGCCTTTTGGTGCTCAACCTGGACCTGCTGGATTTCAGCCGATTATTCCAAATCAACATGTTTCTGTGCAAGCACCACCACCAAGACAGGTTTTACAGTATTCACATATGACTCAGACAAGTCCTTTGGGTCACATTGGGCCCCCAAGAAACCCTGTACAGAATTTGTTAACTCCAACAAATGCTTCACTTTCATTTCCTGTTACTTTAAGCCAACCAACGCCAATAGGACAACATCAGACATCTGTGTCTTCAATGCATCTACCTATGTCTGGTATATCGTCATCAATACCTAACCAGTCATTGACCCATCTAGGGGTCTCTTCTGGCCAGAACGAAGCCCCTGTCACTGTTAAAATGTCTGTTGGTCCCAGCAATATGGTGCCAATGGCTTCACCAGTGGTTCCACCTGCAAGACCTGTTTCTCTACATCAACAGCCAGATGTTGCATTTAAGCCACCACAGTCAAATATGTCAATGATGCCACGATCTGCCACCTTTCCTCCACATCAAGTAGGAATATCCCCTGGACAACCATCTTCTTTGAGACCAATGCCTGTACCAATATCTGCAAACCATTTATTGGGACCTGTTTCATTTCCTTCACCTGGAATATCCCCTTCACTTCCATTGCCTCAGCAAGCAGGAATACCTAATCTTGCTTTTGGAGTTGCTCCTTATCACACCCATGTAAAACCACCAGTCTTGGGGACATCAAAATCTGGAAATTTTACTTTTCAATCACATCTGCCCAATGCAGACTATGGTCAAGTCTATTCTGGACCAAACAGTCAATCAGGTGCTACACAAGAACCACCTTCTGGTCCACGACCTCCACCATTTGGGTTTGCTGTGCCTGATCAGCCTCGTCAAATCTTTCCAAGGACACAATTCCCTGGTCAAGTGGATCAAGCCGTTGCCTTTGGGGGAAGATCAGGTTCCATCTCGAACTCAATTCCACCACCCAGACATGGTGTGTTTCCATATGCTGGTCAACCTGCACCTAGATCATCAGCCGCACAAATGGGTATGAAGAACTTCATTTCTGCCCCACAAATTCCAAATTTGACCAGTGCTGGTTCCCAAAGAGGCATGCCTATTCGAAAAAGCTATGCTACTCAGATGGCATGGGCAGATATCTCAATGCCTCTGAATCAAAAGTTTGTCAGCAATCCCCCCATGGCTTCTGGTAAGATTGCATATGCTACAGACCAAATTTATGATCCCTTTTCACCCACTTCTGCACCTCCACAACACAAAGGTAATCCTGGAAAATGA 2598 0.4388 MRRKSKNEVVIVFELGDDVEFSGIGGFIPFPAPSPPWIGVVVVGAATFGIALLMVVEKDHLRPKLLRTNRRTPITVSGLFNKRMSAEIDSTCAPEPHKMSGQKLSIFSAKSGFVIPKNKLSGSLVPIFRGAKKHGVTVGATNEESSKQIERKSKWGPDLTQDAAVRRGKVLALQIRVDQITKQLESEKLEVGDTQNLNPDQSKSGPRITSKKSEMLELEKREAIGEILKLDPSYKPPRGFKPLLKEASIPLPVQEYPGYNFVGLIYGLEGDNQKQLEKETGAKIKIHGIKADTGEKGEIKPGTDIQCNYKEMHVNLSADSFEKVDAAMSIIELLVTSVIGNLAAGSTPSISVSRYSTNVLSQSHECPPSHADSLSLENQAVLQPVAVTQMHGDNFQYSSPWFSVVPSHSPVFASSGSVALPNPLGLARTPHFPSHTSNMTSPFGAQPGPAGFQPIIPNQHVSVQAPPPRQVLQYSHMTQTSPLGHIGPPRNPVQNLLTPTNASLSFPVTLSQPTPIGQHQTSVSSMHLPMSGISSSIPNQSLTHLGVSSGQNEAPVTVKMSVGPSNMVPMASPVVPPARPVSLHQQPDVAFKPPQSNMSMMPRSATFPPHQVGISPGQPSSLRPMPVPISANHLLGPVSFPSPGISPSLPLPQQAGIPNLAFGVAPYHTHVKPPVLGTSKSGNFTFQSHLPNADYGQVYSGPNSQSGATQEPPSGPRPPPFGFAVPDQPRQIFPRTQFPGQVDQAVAFGGRSGSISNSIPPPRHGVFPYAGQPAPRSSAAQMGMKNFISAPQIPNLTSAGSQRGMPIRKSYATQMAWADISMPLNQKFVSNPPMASGKIAYATDQIYDPFSPTSAPPQHKGNPGK 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00013 865 PANTHER RNA-BINDING KH DOMAIN-CONTAINING PROTEIN 96 858 - -
Gma18g00013 865 Gene3D K Homology domain, type 1 240 349 IPR036612 GO:0003723
Gma18g00013 865 Coils Coil 170 190 - -
Gma18g00013 865 MobiDBLite consensus disorder prediction 695 711 - -
Gma18g00013 865 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 248 340 IPR036612 GO:0003723
Gma18g00013 865 PANTHER RNA-BINDING PROTEIN RELATED 96 858 IPR045071 -
Gma18g00013 865 MobiDBLite consensus disorder prediction 695 735 - -
Gma18g00013 865 SMART kh_6 243 336 IPR004087 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00013 Gma-Chr18 113223 127860 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00013 K13095 - gmx:102668428 1542.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00013 18 113223 127860 Gma11g02570 11 40698647 40704165 GST