Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02570 ATGAGTGCTGAGATTGATTCAACTTATGCTCCTGAACCTCACAAAATGTCTGGAGCAACTACCAGTGGCCAAAAGCTCTCTATATTTTCTGCCAAATCTGGATTTGTCATCCCTAAAAACAAATTGTCAGGGTCGCTGGTCCCTATTTTCCGAGGGGCTAAACAACATGGGGTCACTGCTGCTGCCATCAATGAAGAAAGTTCAAAACAAATTGAGAGGAGATCAAAATGGGGTCCTGATCTCACACAAGATGCAGCTGTCAGGAGGGGAAAAGTTTTAGCTTTGCAGATTCGAGTGGATCAAATTACAAAGCAGTTGGAATCAGAAAAACTGGAAGTTGGGGACACTCAGAACTTGAATCCAGATCAAAGCATATCTGGCCCTCAAATTAACAGCAAGAAGGCAGAAATGCTCGAACTTGAAAAGCGGGAAGCAATAGGTGAAATACTAAAATTAGATCCCAGTTACAAGCCTCCACGTGGTTTTAAACCATTGTTAAAAGAAGCCAGCATTCCTTTGCCTGTCCAAGAATATCCTGGGTACAATTTTGTTGGTCTAATATATGGGCCTGAAGGTGATAATCAAAAACAACTAGAAAAGGAAACTGGTGCGAAGATAAAAATTCATGGAATCAAAGCAGACACAGGAGAGAAAGGTGAAATTAAACCCGGAACTGATATCCAGTGCAATTACAAAGAGATGCATGTTAACCTATCAGCTGATAGTTTTGAAAAAGTGGATGCTGCTATGTTAATCATTGAACTGCTAATCACCTCTGTAACAGAGAATTTAGCTGCTGGTTCTACACCCTCTATATCAGTTTCTAGGGACAGCACTAATGTTCTGAGTCAAAGGCAAGAAGGCCATGCAGATTCTCTATCTCTGGAAAACCAGGCTGTGTTGCAACCAGTAGCTGTTACACAAATGCATGGTGATAACTTCCAATACTCTAGTCCATGGTTTTCAGTGGTTCCATCTCATACCCCTGTGTTTGCTTCGTCTGGCACTGTAGCCCCCCCAAATCCACTAGGTCTTGCTAGAACTCCCCATTTTTCATCACAAACTTCAAACATGGCTTCGACTTTTGGTGCTCAACCTGGACCTGTTGCTGGATTTCAGTCGATTATTCCAAATCAACATGTTTCTGTGCAAACACCACCACCAAGACAGATTTTACAGTATTCGCATATGACTCAGACAAGTCCTTTGGGTCACATTGGGCCCCTAAGAAATCCTGTACAAAATTTGTCAACTCCAAATTCTTCATTTTCATTTCCTGTTACTTTAAGCCAAGCAATGCCAATAGGACAACATCAGACATCTGTGTCTTCAATGCATCTACCTATATCTGGTATATCATCACCACCGATACCTAACCAGCCATTGACCCATCTTGGTGTCTCTTCTGGCCTGAACGAAGCCCCTGTCACTGTTAAAATGTCTGTTGGTCCCAGCAATATGGGGCCAGTGGTTCCACCTGCAAGACCTGTTTCTCTACATCAACAGCCAGATGTTGCATTTAAGCCACCGCAGTCAAATATGTCAATGATTACACGATCTGCCACCTTTCTTCCACATCAAGTAGGAATTTCCCCTGGACAACCATCTTCTTTGAGATCAATGCCTGTACCAATACGTGCACCTACACATTTATCTGCAAACCATTTATCAGGACCTGTTTCATTTCCTTCACGTGGAATATCCCCTTCACTTCCATTGCCTCAGCAAGCAGGAATACCTAATCTTGCTTCTGGAGTTGCTCCTTATCACACCCATGTAAAACCACCAGTCTTGGGGACATCAAAATCTGGAAATTTTACTTTTCAATCACATCTGCCCAATGCAGACTATGGTCAAGTGTTTTCTGGACCAAACAGTCAATCAGGTGCTACACAAGAGCCACCTTCTGGTCCACGACCTCCACCATTTGGGTTTGCTGTGCCTGATCAGCCTCGTCAAATCTTTCCAAGGACACAATTCCCTGGTCAAGTGGATCAAGCCGTTCCCTTTGGGGTAAGATTAGGTTCCATCTCGAACTCAATTCCACCACCCAGACATGCTGTATTTCCATATGCTGGTCAACCTGCACCTAGATCGTCAGTCCCACAAATGGGTATGAAGAACTTCATTTCTGCCCCTCAAATGCCAAATTTGACCAATGCTGGTGCTCAAAGAGGCATGCCTATTCGGCAAAGCTATCCTCCTCAGATGGCACGGCCAGATATCCCAATGCCTCTGAATCAAAAGTTTGTCAACAATCCCCCCATGGCTTCTGGTAAGATAGCATATGCTGCGGACCAAATTTATGATCCCTTTTCACCCACTTCTGCACCTCCACAACAGAAAGGTAATCCTGGAAAATGA 2364 0.4365 MSAEIDSTYAPEPHKMSGATTSGQKLSIFSAKSGFVIPKNKLSGSLVPIFRGAKQHGVTAAAINEESSKQIERRSKWGPDLTQDAAVRRGKVLALQIRVDQITKQLESEKLEVGDTQNLNPDQSISGPQINSKKAEMLELEKREAIGEILKLDPSYKPPRGFKPLLKEASIPLPVQEYPGYNFVGLIYGPEGDNQKQLEKETGAKIKIHGIKADTGEKGEIKPGTDIQCNYKEMHVNLSADSFEKVDAAMLIIELLITSVTENLAAGSTPSISVSRDSTNVLSQRQEGHADSLSLENQAVLQPVAVTQMHGDNFQYSSPWFSVVPSHTPVFASSGTVAPPNPLGLARTPHFSSQTSNMASTFGAQPGPVAGFQSIIPNQHVSVQTPPPRQILQYSHMTQTSPLGHIGPLRNPVQNLSTPNSSFSFPVTLSQAMPIGQHQTSVSSMHLPISGISSPPIPNQPLTHLGVSSGLNEAPVTVKMSVGPSNMGPVVPPARPVSLHQQPDVAFKPPQSNMSMITRSATFLPHQVGISPGQPSSLRSMPVPIRAPTHLSANHLSGPVSFPSRGISPSLPLPQQAGIPNLASGVAPYHTHVKPPVLGTSKSGNFTFQSHLPNADYGQVFSGPNSQSGATQEPPSGPRPPPFGFAVPDQPRQIFPRTQFPGQVDQAVPFGVRLGSISNSIPPPRHAVFPYAGQPAPRSSVPQMGMKNFISAPQMPNLTNAGAQRGMPIRQSYPPQMARPDIPMPLNQKFVNNPPMASGKIAYAADQIYDPFSPTSAPPQQKGNPGK 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02570 787 ProSiteProfiles Type-1 KH domain profile. 182 208 - -
Gma11g02570 787 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 169 263 IPR036612 GO:0003723
Gma11g02570 787 SMART kh_6 165 258 IPR004087 GO:0003676
Gma11g02570 787 Pfam KH domain 182 224 IPR004088 GO:0003723
Gma11g02570 787 PANTHER RNA-BINDING PROTEIN RELATED 19 781 IPR045071 -
Gma11g02570 787 Coils Coil 92 112 - -
Gma11g02570 787 MobiDBLite consensus disorder prediction 1 22 - -
Gma11g02570 787 MobiDBLite consensus disorder prediction 615 633 - -
Gma11g02570 787 PANTHER RNA-BINDING KH DOMAIN-CONTAINING PROTEIN 19 781 - -
Gma11g02570 787 Gene3D K Homology domain, type 1 162 289 IPR036612 GO:0003723
Gma11g02570 787 MobiDBLite consensus disorder prediction 615 650 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02570 Gma-Chr11 40698647 40704165 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02570 K13095 - gmx:100777227 1566.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00013 18 113223 127860 Gma11g02570 11 40698647 40704165 GST