Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02198 ATGGCCTCGGAAACCCACCATCATGTGCAAGGCCTAACACCCGAGGAACTAACCCAACTTGAACCTATCATAAAAAAATACCATCTATTCGAAGCATCTTCCAACAAATGTTTTTCCATAATAACACACCGGATTGAAGCACCCGCGAGCAGCGTGTGGCCCTTGGTCCGGAACTTCGACAACCCTCAGAAGTACAAACACTTCATCAAAGGGTGCAACATGAAAGGGGATGGCAGCGTTGGAAGTATTAGGGAAGTAACTGTGGTCTCGGGCCTCCCGGCCTCAACCAGTACCGAGAGGCTCGAGATTTTGGACGATGACAAACACGTCCTAAGTTTTAGGGTCGTTGGCGGCGAACACCGACTCCAAAACTATCGTTCAGTCACATCCGTGAACGAATTTCACAAAGAGGGTAAGGTTTATACTATTGTTTTGGAATCTTACATCGTAGATATACCTGAAGGGAATACGGAGGAAGATACCAAGATGTTTGTTGACACCGTGGTGAAACTCAATCTTCAAAAACTTGGGGTCGTGGCCATGGCTTCATCAATGAATGGACGATAA 567 0.4656 MASETHHHVQGLTPEELTQLEPIIKKYHLFEASSNKCFSIITHRIEAPASSVWPLVRNFDNPQKYKHFIKGCNMKGDGSVGSIREVTVVSGLPASTSTERLEILDDDKHVLSFRVVGGEHRLQNYRSVTSVNEFHKEGKVYTIVLESYIVDIPEGNTEEDTKMFVDTVVKLNLQKLGVVAMASSMNGR 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02198 188 SUPERFAMILY Bet v1-like 40 177 - -
Gma17g02198 188 PANTHER ABSCISIC ACID RECEPTOR PYL2-LIKE 14 183 - -
Gma17g02198 188 CDD PYR_PYL_RCAR_like 41 176 - -
Gma17g02198 188 PANTHER - 14 183 - -
Gma17g02198 188 Pfam Polyketide cyclase / dehydrase and lipid transport 43 176 IPR019587 -
Gma17g02198 188 Gene3D - 1 188 IPR023393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02198 Gma-Chr17 39692246 39692812 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g02198 K14496 - gmx:100812097 379.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02198 17 39692246 39692812 Gma17g02198 17 39692246 39692812 ECH
Gma17g02198 17 39692246 39692812 Gma14g00851 14 9135812 9136901 GST
Gma17g02198 17 39692246 39692812 Gma04g00470 04 4204010 4204579 PCT
Gma17g02198 17 39692246 39692812 Gma06g00464 06 3966807 3967469 PCT
Gma04g00470 04 4204010 4204579 Gma17g02198 17 39692246 39692812 PCT
Gma06g00464 06 3966807 3967469 Gma17g02198 17 39692246 39692812 PCT