Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00470 ATGGCTTCAGAAGCATATCCTGTGCTGGGTCTAACCCCAGAGGAATTCTCGGAACTCGAAAGCATCATCAACACGCACCACAAGTTCGAACCTTCCCCTGAAATCTGCAGCTCCATCATAGCGCAGCGCATCGACGCGCCGGCACACACGGTGTGGCCCCTCGTCCGGAGCTTCGAGAACCCTCAGAAGTACAAGCACTTCGTCAAGAGCTGCAACATGCGCTCCGGCGACGGCGGCGTCGGCAGCATCCGCGAGGTCACCGTCGTGTCGGGCCTCCCCGCCTCCACCAGCACCGAGCGCCTCGAGATCCTCGACGACGACAAGCACCTCCTCAGCTTCCGCGTCGTCGGCGGCGAACACCGCCTCCACAACTACCGCTCCGTCACCTCCGTCAACGAGTTCAAGAACCCCGACAACGGTAAGGTTTACACCATTGTTTTGGAATCTTACGTCGTCGACATACCCGAAGGAAACACCGGTGTCGATACTAAGATGTTTGTTGACACTGTCGTCAAACTTAACCTTCAGAAACTCGGCGAGGTCGCTATGGCTACTACCACACTGCACTGA 570 0.5754 MASEAYPVLGLTPEEFSELESIINTHHKFEPSPEICSSIIAQRIDAPAHTVWPLVRSFENPQKYKHFVKSCNMRSGDGGVGSIREVTVVSGLPASTSTERLEILDDDKHLLSFRVVGGEHRLHNYRSVTSVNEFKNPDNGKVYTIVLESYVVDIPEGNTGVDTKMFVDTVVKLNLQKLGEVAMATTTLH 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00470 189 Gene3D - 2 189 IPR023393 -
Gma04g00470 189 CDD PYR_PYL_RCAR_like 36 182 - -
Gma04g00470 189 Pfam Polyketide cyclase / dehydrase and lipid transport 42 180 IPR019587 -
Gma04g00470 189 PANTHER ABSCISIC ACID RECEPTOR PYL2-LIKE 13 187 - -
Gma04g00470 189 PANTHER - 13 187 - -
Gma04g00470 189 SUPERFAMILY Bet v1-like 37 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00470 Gma-Chr4 4204010 4204579 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00470 K14496 - gmx:100794619 381.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00470 04 4204010 4204579 Gma04g00470 04 4204010 4204579 ECH
Gma04g00470 04 4204010 4204579 Gma06g00464 06 3966807 3967469 GST
Gma17g02198 17 39692246 39692812 Gma04g00470 04 4204010 4204579 PCT
Gma14g00851 14 9135812 9136901 Gma04g00470 04 4204010 4204579 PCT
Gma04g00470 04 4204010 4204579 Gma17g02198 17 39692246 39692812 PCT
Gma04g00470 04 4204010 4204579 Gma14g00851 14 9135812 9136901 PCT