Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02179 ATGCAAGGCCTGCGCCGCTGCTCAAACGACGTCGTCCAGCTAGACCTCTCCACCCCAACAACAaccaccaccaccaccaccaccaccacAAACAACACAAACTCTTCTTCTTTCTCCTCTTCTTGTTCTCTCTCCATCGACGTGGACGAATCAACGGAAGCCCGCATCCAGCGCCTGATCTCCGAGCACCCCGTCATAATCTTCACGCGCTCCTCCTGCTGCATGTGCCACGTCATGAAGAAGCTCCTCGCCACCATCGGCGTCAACCCCACCGTCATCGAATTGGACGACCACGAGATCGCCGCCCTCCCCCTCCCCGACCACCGCACCCCCGCCGTCTTCATCGGAGGCTCCTCCGTCGGCGGCCTCGAGTCCCTCGTCGCCCTCCACGTCTCCGGCCACCTCGTCCCCAAACTCGTCCAAGTCGGCGCCCTCTGGGTATGA 444 0.5811 MQGLRRCSNDVVQLDLSTPTTTTTTTTTTTNNTNSSSFSSSCSLSIDVDESTEARIQRLISEHPVIIFTRSSCCMCHVMKKLLATIGVNPTVIELDDHEIAALPLPDHRTPAVFIGGSSVGGLESLVALHVSGHLVPKLVQVGALWV 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02179 147 TIGRFAM GlrX-like_plant: glutaredoxin-like family 56 147 IPR011905 -
Gma17g02179 147 ProSiteProfiles Glutaredoxin domain profile. 53 146 - -
Gma17g02179 147 Pfam Glutaredoxin 65 119 IPR002109 -
Gma17g02179 147 CDD GRX_GRXh_1_2_like 64 138 - -
Gma17g02179 147 Gene3D Glutaredoxin 46 146 - -
Gma17g02179 147 PANTHER GLUTAREDOXIN-C6 7 146 - -
Gma17g02179 147 PANTHER GLUTAREDOXIN 7 146 IPR011905 -
Gma17g02179 147 SUPERFAMILY Thioredoxin-like 52 146 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02179 Gma-Chr17 39451553 39451996 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g02179 56 147 Miscellaneous Gene Families AT4G15700 44.000 1.07e-23 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g02179 - - gmx:100778024 218.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02179 17 39451553 39451996 Gma14g00876 14 9492054 9492479 GST
Gma17g02179 17 39451553 39451996 Gma04g00480 04 4272549 4273807 PCT
Gma17g02179 17 39451553 39451996 Gma06g00473 06 4028575 4029673 PCT
Gma04g00480 04 4272549 4273807 Gma17g02179 17 39451553 39451996 PCT
Gma06g00473 06 4028575 4029673 Gma17g02179 17 39451553 39451996 PCT