Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00480 ATGCAAGGCATAGGGATAGGGTGCTGCTCAAACGACGTCGTAGGGCAGCTGGAGCTAAGTCCCACTATGAGCAACTCCTCTTCCTCGCTATCGATGGAGCTGGACGAGTCCCCCGAGAGCCGAATCCAACGGCTGATATCGGAGCACCCCGTCATCATCTTCACCCGATCCTCCTGCTGCATGTGCCACGTCATGAAGAAGCTCCTCGCCACCATCGGCGTCCACCCCACCGTCATCGAATTGGACGACCACGAGATCGCCTCCCTCCCCCTCCCCGACACCACCGCCCCCGCCGCCTTCATCGGCGGCACCTGCATCGGCGGCCTCGAATCCCTCGTCGCCCTCCACGTCAGCGGCCACCTCATCCCCAAACTCGTCCAAGTCGGCGCTCTCTGGTTTGGCAGAATTTAG 411 0.618 MQGIGIGCCSNDVVGQLELSPTMSNSSSSLSMELDESPESRIQRLISEHPVIIFTRSSCCMCHVMKKLLATIGVHPTVIELDDHEIASLPLPDTTAPAAFIGGTCIGGLESLVALHVSGHLIPKLVQVGALWFGRI 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00480 136 TIGRFAM GlrX-like_plant: glutaredoxin-like family 42 132 IPR011905 -
Gma04g00480 136 CDD GRX_GRXh_1_2_like 50 124 - -
Gma04g00480 136 ProSiteProfiles Glutaredoxin domain profile. 39 132 - -
Gma04g00480 136 Gene3D Glutaredoxin 32 133 - -
Gma04g00480 136 Pfam Glutaredoxin 51 105 IPR002109 -
Gma04g00480 136 PANTHER GLUTAREDOXIN-C6 14 132 - -
Gma04g00480 136 PANTHER GLUTAREDOXIN 14 132 IPR011905 -
Gma04g00480 136 SUPERFAMILY Thioredoxin-like 40 132 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00480 Gma-Chr4 4272549 4273807 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00480 41 133 Miscellaneous Gene Families AT4G15660 41.584 3.95e-23 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00480 - K03676 gmx:100791969 265.388
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00480 04 4272549 4273807 Gma06g00473 06 4028575 4029673 GST
Gma17g02179 17 39451553 39451996 Gma04g00480 04 4272549 4273807 PCT
Gma14g00876 14 9492054 9492479 Gma04g00480 04 4272549 4273807 PCT
Gma04g00480 04 4272549 4273807 Gma17g02179 17 39451553 39451996 PCT
Gma04g00480 04 4272549 4273807 Gma14g00876 14 9492054 9492479 PCT