Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02125 ATGAAGTTTATGAAGTTGGGTTCGAAGCCTGATGCTCTTCAAAGCGATGGAAAATCTATCAGGTATATATCATCTGAATTGGCTACAGATATTATCATAACTGTTGGTGAAGTTAAGTTTCACCTGCACAAGTTCCCTCTACTGTCCAAGAGTAATAGTTTACAAAAGTTGCTGTCAAAGGCTAATGAAGAGAATGCTGATGAAATTCAATTGGATGATTTTCCTGGTGGTCCCAAGGCCTTTGAAATATGTGCAAAGTTCTGCTATGGAATGACTGTTACTCTTAATGCTTACAATGTTGTGGCTGCTCGTTGCGCCGCTGAGTACCTTGAGATGACTGAGGATATTGATAGAGGAAACTTGATTTTCAAAATTGAGGTGTTTCTTACCTCGAGTATCTTTCGCAGCTGGAAGGATTCTATAATTGTTCTCCAAACTACTAAATCTCTTCTACCGTGGGCTGAGGACTTAAAGATTGTTGGGAGATGTATAGATTCCATAGCTTCTAAAACTTCTGTGGATCCTGCAAACATCACTTGGTCTTACACTTATAACCGTAAATTATCGGAGCTTGATAAAATCGTTGAGGACAAGATAACACCACAAGAGAAAATTGAGCCTGTTCCTAAGGATTGGTGGGTTGAAGATATATGTGAGCTGGACATTGATCTTTATAAACGTGTAATGATTACTGTCAAGTCAAAGGGAAGAATGGACGGAGTTGTGATTGGCGAGGCACTAAAAATCTATGCTGTAAGATGGTTGCCTGATTCTGTTGATGCATTGGTTTCTGATGCTCATGCCTGGAGGAACAAATCTCTTGTAGAAACAATTGTCTGTTTGTTGCCGTGTGATAATGGCATGGGTTGTTCGTGTAGTTTCTTGCTGAAGCTACTGAAAGTGGCCATATTAGTTGAAGCTGATGAGTCTTCTAGGGGACAATTGATGAAGAGCATTGGTCTAAAATTTCATGAAGCTTCTGTCAAAGATTTACTGATTCCAGCAAGGTTCCCCCAGAATACCAAATATGATGTTGATTTGGTGCAAGATCTTTTGAATCTATACATGACTAACATAAAGGGAAGCCGTGATGTGGTGGTTGAGGAGAAGAAAGATAGAGCAAATGATGAGTCAATTTTAGGACAGAGGTCTTTGTTGAATGTTGGCAAGTTGGTTGATGGTTATCTTGGAGAAATTGCACATGATCCAAATCTCAGCCTCTCTAGCTTTGTTGCTCTATCACAGTCAATTCCAGAGTTTGCTAGACCAAATCATGATGGTCTGTACAGAGCTATAGACGTATACTTGAAGGAGCACCCAAGTTTGACAAAATCTGAAAGGAAGAACATATGTGGACTAATGGATGTCAAGAAATTGACAGTAGAAGCATCGATGCATGCTGCACAGAATGAACGCCTTCCTCTTCGAGTTGTGGTGCAGGTTCTCTATTTTGAGCAGGTCAGAGCTGCTTCCAATGCTCGTGCACTCGGCAACAGTCCACACAATTCTACAAACACTCATGTCAACGGAGACGAGGAGTGTGCGAAATCGGGGGGAGAAAGCTGCCAATCCCTCGACAACCAGATGTGTCACATGAAGATTAGAGATGAACAGTTGCAAAAGAATGGGAAGTTGAACAAGAAGAGTAGCAAGAACAGCAGAAGTGGCATGCAGTTGCTGCCATCTAGGTCAAGGAGAATCTTTGACAAGCTATGGATTGTTGGTAAGGGACAAGGAGAAAATAGAAGCTCAGAGACCTCAGGGAGTTCCAATAGCCCTACTTCTGTAGTCCCTGGAGATACCAAATCATCTGGCTCATCATTGAGACACAGGAGGCATTCTATCTCTTAG 1851 0.4155 MKFMKLGSKPDALQSDGKSIRYISSELATDIIITVGEVKFHLHKFPLLSKSNSLQKLLSKANEENADEIQLDDFPGGPKAFEICAKFCYGMTVTLNAYNVVAARCAAEYLEMTEDIDRGNLIFKIEVFLTSSIFRSWKDSIIVLQTTKSLLPWAEDLKIVGRCIDSIASKTSVDPANITWSYTYNRKLSELDKIVEDKITPQEKIEPVPKDWWVEDICELDIDLYKRVMITVKSKGRMDGVVIGEALKIYAVRWLPDSVDALVSDAHAWRNKSLVETIVCLLPCDNGMGCSCSFLLKLLKVAILVEADESSRGQLMKSIGLKFHEASVKDLLIPARFPQNTKYDVDLVQDLLNLYMTNIKGSRDVVVEEKKDRANDESILGQRSLLNVGKLVDGYLGEIAHDPNLSLSSFVALSQSIPEFARPNHDGLYRAIDVYLKEHPSLTKSERKNICGLMDVKKLTVEASMHAAQNERLPLRVVVQVLYFEQVRAASNARALGNSPHNSTNTHVNGDEECAKSGGESCQSLDNQMCHMKIRDEQLQKNGKLNKKSSKNSRSGMQLLPSRSRRIFDKLWIVGKGQGENRSSETSGSSNSPTSVVPGDTKSSGSSLRHRRHSIS 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02125 616 Pfam NPH3 family 211 464 IPR027356 -
Gma17g02125 616 SUPERFAMILY POZ domain 22 115 IPR011333 -
Gma17g02125 616 Pfam BTB/POZ domain 26 116 IPR000210 GO:0005515
Gma17g02125 616 Gene3D Potassium Channel Kv1.1; Chain A 5 118 IPR011333 -
Gma17g02125 616 PANTHER OS12G0117600 PROTEIN 4 604 IPR043454 -
Gma17g02125 616 MobiDBLite consensus disorder prediction 577 616 - -
Gma17g02125 616 MobiDBLite consensus disorder prediction 579 604 - -
Gma17g02125 616 ProSiteProfiles BTB domain profile. 29 97 IPR000210 GO:0005515
Gma17g02125 616 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN NPY1 4 604 IPR029961 GO:0060918|GO:0099402
Gma17g02125 616 CDD BTB_POZ_NPY3-like 21 124 - -
Gma17g02125 616 SMART BTB_4 29 127 IPR000210 GO:0005515
Gma17g02125 616 ProSiteProfiles NPH3 domain profile. 211 488 IPR027356 -
Gma17g02125 616 MobiDBLite consensus disorder prediction 495 521 - -
Gma17g02125 616 MobiDBLite consensus disorder prediction 495 511 - -
Gma17g02125 616 MobiDBLite consensus disorder prediction 538 561 - -
Gma17g02125 616 MobiDBLite consensus disorder prediction 545 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02125 Gma-Chr17 38776615 38780928 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g02125 22 507 EF-hand Containing Proteins AT3G44820 33.918 2.50e-94 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g02125 - - gmx:100809437 1157.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02125 17 38776615 38780928 Gma17g02125 17 38776615 38780928 ECH
Gma17g02125 17 38776615 38780928 Gma14g00937 14 10594249 10598697 GST