Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00937 ATGAAGTTTATGAAGTTGGGTTCGAAGCCTGATGCTcTTCAAAGTGATGAAAAATCTATCAGGTATATATCATCTGAATTGGTTACAGATATTATCATAACTGTTGGTGAAGTTAAGTTTCACCTGCACAAGTTCCCTCTACTGTCCAAGAGTAATCGTTTACAAAAGTTGCTGTCAAAGGCTAATGAAGAGAATGCTGATGAAATTCAATTGGATGATTTTCCTGGTGGTCCCAAGGCTTTTGAAATATGTGCAAAGTTCTGCTATGGAATGACTGTTACTCTTAATGCTTACAATGTTGTGGCTGCTCGTTGTGCCGCTGAGTACCTTGAGATGACTGAGGATATTGATAGAGGGAACTTAATTTTCAAAATTGAGGTGTTTCTTACCTCAAGTATCTTTCGCAGCTGGAAGGATTCTATAATTGTTCTCCAAACTACTAAATCTCTTTTGCCATGGTCTGAGGACTTAAAGATTGTTGGGAGATGTATCGATTCCATAGCTTCTAAAACTTCTGTGGATCCAGCAAACATCACTTGGTCTTACACTTATAACCGTAAGTTATCAGAGCTTGATAAAATTGTTGAGGACAAGATAACACCACAAGAGAAAATTGAGCCTGTTCCTAAGGAATGGTGGGTTGAAGATATATGTGAACTGGACATTGATCTTTATAAACGGGTAATGATTACTGTCAAGTCAAAGGGAAGAATGGACGGAGTTGTGATCGGCGAGGCACTAAAAATCTATGCTGTAAGATGGTTGCCTGATTCTGTTGATGCATTGGTTTCGGATGCCCATGCCTGGAGGAACAAATCTCTGGTAGAAACAATTGTCTGTTTATTGCCGTGCGATAATGGCATGGGTTGTTCATGTAGTTTCTTGCTGAAGCTATTGAAAGTGGCCATATTGGTTGAAGCTGATGAGTCTTCAAGGGGACAATTGATGAAGAGCATTGGCCTAAAATTTCATGAAGCTTCTGTCAAAGATTTACTAATTCCAGCAAGGTTTCCCCAGAATACCAAATATGATGTTGATTTGGTGCAAGATCTTTTGAATATATACAAGACTAACATAAAGGGAAGCTGTGATGTGGAGGTTGAGGAGAAGAAAGATAAAGCAAATGATGAGTCTATTTTAGGACAGATGTCTTTATTGAATGTTGGCAAGTTGGTAGATGGGTATCTTGGAGAAATTGCGCATGATCCAAATCTCAGCctctctagttttgttgatctgtcacagtcaattccagagtttgctagaccaaatcatgatggcctgtacagagctatagacatctacttgaagGAGCACCCAAGTTTGACAAAAGCTGAAAGGAAAAAGATATGTGGACTAATGGATGTCAAGAAATTGACAGTGGAAGCATCAATGCATGCTGCACAGAACGAACGCCTTCCTCTTCGAGTTGTGGTCCAGgttagagacaaagagttccacaagaatggaaaattgaacaagagtagcaagaacagcagaagtgGCATGCAGTTGTTGCCATCTGGGTCAAGGAGAATTTTTGACAAGTTATGGATTGTGGGGAAAGGACAAGGAGAAAATAGGAGCTCAGAGACTTCAGGGAGTTCCAATAGCCCTACTTCTGTAGTCCCTGGAGATACCAAATCATCTGGTTCATCATTGCGACACAGGAGGCTTTCCATCTCTTAG 1689 0.3647 MKFMKLGSKPDALQSDEKSIRYISSELVTDIIITVGEVKFHLHKFPLLSKSNRLQKLLSKANEENADEIQLDDFPGGPKAFEICAKFCYGMTVTLNAYNVVAARCAAEYLEMTEDIDRGNLIFKIEVFLTSSIFRSWKDSIIVLQTTKSLLPWSEDLKIVGRCIDSIASKTSVDPANITWSYTYNRKLSELDKIVEDKITPQEKIEPVPKEWWVEDICELDIDLYKRVMITVKSKGRMDGVVIGEALKIYAVRWLPDSVDALVSDAHAWRNKSLVETIVCLLPCDNGMGCSCSFLLKLLKVAILVEADESSRGQLMKSIGLKFHEASVKDLLIPARFPQNTKYDVDLVQDLLNIYKTNIKGSCDVEVEEKKDKANDESILGQMSLLNVGKLVDGYLGEIAHDPNLSLSSFVDLSQSIPEFARPNHDGLYRAIDIYLKEHPSLTKAERKKICGLMDVKKLTVEASMHAAQNERLPLRVVVQVRDKEFHKNGKLNKSSKNSRSGMQLLPSGSRRIFDKLWIVGKGQGENRSSETSGSSNSPTSVVPGDTKSSGSSLRHRRLSIS 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00937 562 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN NPY1 492 550 IPR029961 GO:0060918|GO:0099402
Gma14g00937 562 ProSiteProfiles NPH3 domain profile. 211 488 IPR027356 -
Gma14g00937 562 PANTHER OS12G0117600 PROTEIN 4 481 IPR043454 -
Gma14g00937 562 PANTHER OS12G0117600 PROTEIN 492 550 IPR043454 -
Gma14g00937 562 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN NPY1 4 481 IPR029961 GO:0060918|GO:0099402
Gma14g00937 562 SMART BTB_4 29 127 IPR000210 GO:0005515
Gma14g00937 562 Pfam BTB/POZ domain 25 116 IPR000210 GO:0005515
Gma14g00937 562 Gene3D Potassium Channel Kv1.1; Chain A 7 118 IPR011333 -
Gma14g00937 562 CDD BTB_POZ_NPY3-like 21 124 - -
Gma14g00937 562 Pfam NPH3 family 211 464 IPR027356 -
Gma14g00937 562 ProSiteProfiles BTB domain profile. 29 97 IPR000210 GO:0005515
Gma14g00937 562 MobiDBLite consensus disorder prediction 524 562 - -
Gma14g00937 562 SUPERFAMILY POZ domain 22 115 IPR011333 -
Gma14g00937 562 MobiDBLite consensus disorder prediction 486 506 - -
Gma14g00937 562 MobiDBLite consensus disorder prediction 525 562 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00937 Gma-Chr14 10594249 10598697 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g00937 22 481 EF-hand Containing Proteins AT3G44820 33.676 1.26e-88 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00937 - - gmx:100790291 1043.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00937 14 10594249 10598697 Gma14g00937 14 10594249 10598697 ECH
Gma17g02125 17 38776615 38780928 Gma14g00937 14 10594249 10598697 GST