Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01993 ATGGGTAGGAGAGGAATCAAGCTATTCGATGAAGAAAGGAACGGTCTTTTTTCAATTTCCAATTTTGGGTCTCAATGGGGTGGTGTTAGAGGTGATGGTGTTCAAGACCCTGTGAATTTGGCTGTGTATGCAAGCATTAGTCAAATGGGAATGGGGTTTGGTGTTCAAGAACCAAACCCTTCTTCTTCTTCTTCTGATGGTGATAATTCCCAACACAACGGTGGCATGAGCATGAGAATGAGGATTCCGTGCACCGAGTTGTACGTTCGGTACGTGCAATCCGAGGGGAAGGTGAAGATTCTGGGGGTTCCTGAGGAGGAGGAGGAAGAGGTGGTGAAGGGGGTGAAGAAAAAGAAAAAAGGGGGTGTCTTTAGAGGGTTGAGGATTAAGGTGAAGAACTCTTCTCTTAGGAGGTTGGTTAGTGGTGCCTTTGCTGGGGCGGTTTCACGGACCACTGTGGCACCTTTGGAGACCATAAGGACTCATTTGATGGTCGGAAGTAGTGGCAGTTCCACTGGGGAGGTCTTCAGGAACATCATGGAGACTGATGGATGGAAGGGCTTGTTTAGGGGTAATTTCGTCAATGTGATTCGAGTTGCTCCTAGCAAGGCCATTGAGCTATTAGCTTATGAAACTGTTAACAAGAACCTCTCACCAAAGCCAGGGGAGCATTCCAAACTCCCTATTCCAGCATCATTGATAGCAGGTGCTTGTGCTGGAGTTTGTTCAACTATATGCACATATCCTCTAGAGTTGCTAAAGACTCGACTAACTATCCAGAGGGGTGTTTATGATGGTCTACTAGATGCATTCCTGAAAATAGTTAGAGAAGAGGGTGCAGGAGAACTTTACAGAGGTCTTACTCCGAGTCTGATTGGAGTAATTCCATATTCTGCCACCAATTACTTTGCCTATGACACCTTGAGGAAAGCATACAGAAAAATTTTCAAAAAAGAGAAGATTGGCAACATTGAAACCCTTTTGATAGGATCAGCAGCTGGTGCATTTTCAAGTAGTGCTACCTTTCCACTTGAAGTGGCTCGCAAACACATGCAAGTGGGAGCCCTCAGTGGAAGGCAAGTTTACAAAAATGTGATTCATGCCCTTGCAAGCATTCTTGAGCAAGAAGGGATCCAAGGATTATATAAAGGGTTGGGACCTAGCTGCATGAAGTTGGTGCCAGCTGCAGGAATTTCTTTCATGTGCTATGAAGCATGCAAGAGGATATTGGTAGAGGATGATGATGATGAGGAGTAG 1257 0.4535 MGRRGIKLFDEERNGLFSISNFGSQWGGVRGDGVQDPVNLAVYASISQMGMGFGVQEPNPSSSSSDGDNSQHNGGMSMRMRIPCTELYVRYVQSEGKVKILGVPEEEEEEVVKGVKKKKKGGVFRGLRIKVKNSSLRRLVSGAFAGAVSRTTVAPLETIRTHLMVGSSGSSTGEVFRNIMETDGWKGLFRGNFVNVIRVAPSKAIELLAYETVNKNLSPKPGEHSKLPIPASLIAGACAGVCSTICTYPLELLKTRLTIQRGVYDGLLDAFLKIVREEGAGELYRGLTPSLIGVIPYSATNYFAYDTLRKAYRKIFKKEKIGNIETLLIGSAAGAFSSSATFPLEVARKHMQVGALSGRQVYKNVIHALASILEQEGIQGLYKGLGPSCMKLVPAAGISFMCYEACKRILVEDDDDEE 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01993 418 ProSiteProfiles Solute carrier (Solcar) repeat profile. 321 409 IPR018108 -
Gma17g01993 418 MobiDBLite consensus disorder prediction 53 76 - -
Gma17g01993 418 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 31 415 - -
Gma17g01993 418 PANTHER SOLUTE CARRIER FAMILY 25 31 415 - -
Gma17g01993 418 ProSiteProfiles Solute carrier (Solcar) repeat profile. 133 216 IPR018108 -
Gma17g01993 418 Pfam Mitochondrial carrier protein 134 217 IPR018108 -
Gma17g01993 418 Pfam Mitochondrial carrier protein 321 412 IPR018108 -
Gma17g01993 418 Pfam Mitochondrial carrier protein 226 314 IPR018108 -
Gma17g01993 418 PRINTS Mitochondrial carrier protein signature 138 151 IPR002067 GO:0055085
Gma17g01993 418 PRINTS Mitochondrial carrier protein signature 151 165 IPR002067 GO:0055085
Gma17g01993 418 PRINTS Mitochondrial carrier protein signature 191 211 IPR002067 GO:0055085
Gma17g01993 418 PRINTS Mitochondrial carrier protein signature 242 260 IPR002067 GO:0055085
Gma17g01993 418 PRINTS Mitochondrial carrier protein signature 284 302 IPR002067 GO:0055085
Gma17g01993 418 PRINTS Mitochondrial carrier protein signature 330 352 IPR002067 GO:0055085
Gma17g01993 418 SUPERFAMILY Mitochondrial carrier 134 405 IPR023395 -
Gma17g01993 418 ProSiteProfiles Solute carrier (Solcar) repeat profile. 227 311 IPR018108 -
Gma17g01993 418 Gene3D Mitochondrial carrier domain 129 415 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01993 Gma-Chr17 35741723 35745061 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01993 1 416 Organic Solute Cotransporters AT4G32400 60.671 2.75e-174 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01993 K14684 - gmx:100816041 780.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01993 17 35741723 35745061 Gma17g01993 17 35741723 35745061 ECH
Gma17g01993 17 35741723 35745061 Gma14g01102 14 14999962 15002804 GST
Gma17g01993 17 35741723 35745061 Gma04g00629 04 5766858 5771010 PCT
Gma17g01993 17 35741723 35745061 Gma06g00617 06 5588515 5593141 PCT
Gma04g00629 04 5766858 5771010 Gma17g01993 17 35741723 35745061 PCT
Gma06g00617 06 5588515 5593141 Gma17g01993 17 35741723 35745061 PCT