Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00617 ATGGGTAGAAGGGGAATCCAACTGTTTGATGAGAAAAGAGATGTTTTTTTCTCTGTCTGCAATTTGGGGTTTGAATCCAAGGATGGCTACCATCAATTCGGAGGTTTGTTTGCCAGTGTTGGTCAAATGGGAATGGGGGTTGGCGTGCAACCTAACGACCCTTCTGACTCGCGTAACAATGATGGCATGAAATTTCCCTTAAACGAATTGTTCCTCAAGCATGTTCAATCTCAGGGGAAGGAAGAGGGTGTTGAGGAAGGAGTTAAGGGGAAGAAGAATAAAAAGGGTGGTGGTGTTTCACTCAAGCTTAAGATCAGGAACCCTTCACTGAGGAGGTTGTTTAGTGGGGCAGTTGCCGGGACCGTGTCTCGGACCGCCGTGGCGCCTTTGGAGACTATAAGGACTCTCTTGATGGTGGGGAGTAGTGGCCATTCCACCACTGAGGTGTTCGACAATATTATGAAAACTGATGGCTGGAAGGGATTGTTTAGGGGTAATTTTGTTAATGTCATTCGGGTTGCGCCTAGCAAGGCCATTGAGCTATTTGCTTTTGATACAGTAAACAAGAACCTATCCCCAAAGCCTGGGGAGCAGTCCAAAATCCCAATTCCTGCCTCATTGATTGCAGGTGCCTGTGCTGGAGTCAGTTCCACTATATGTACATATCCACTTGAATTAGTCAAGACTCGACTAACTGTCCAGAGCGATGTTTATCATGGTCTGCTTCATGCATTCGTGAAAATAATTCGAGAAGAGGGTCCTGCTCAACTTTATAGAGGCCTCGCAGCTAGTCTTATTGGAGTTGTCCCATATGCTGCTACCAATTACTATGCCTACGACACTTTAAGGAAAGCATACCAGAAATTTTCTAAACAAAAGAAGGTCGGCAACATTGAAACCCTTTTGATTGGTTCAGCAGCTGGTGCTTTTTCAAGTAGTGCAACTTTTCCACTTGAGGTGGCTCGCAAGCAGATGCAACTTGGAGCTCTCAGTGGAAGGCAGGTTTACAAGGATGTGTTTCATGCCCTTGCATGCATATTTGAACAAGAAGGGATCCATGGTTTATATAGAGGGCTGGCACCTAGTTGCATGAAGTTGGTACCAGCTGCTGGAATCTCTTTCATGTGCTACGAAGCATGCAAGAGGATATTGCTAGAAAACGATGAGGAGGATTAG 1176 0.4558 MGRRGIQLFDEKRDVFFSVCNLGFESKDGYHQFGGLFASVGQMGMGVGVQPNDPSDSRNNDGMKFPLNELFLKHVQSQGKEEGVEEGVKGKKNKKGGGVSLKLKIRNPSLRRLFSGAVAGTVSRTAVAPLETIRTLLMVGSSGHSTTEVFDNIMKTDGWKGLFRGNFVNVIRVAPSKAIELFAFDTVNKNLSPKPGEQSKIPIPASLIAGACAGVSSTICTYPLELVKTRLTVQSDVYHGLLHAFVKIIREEGPAQLYRGLAASLIGVVPYAATNYYAYDTLRKAYQKFSKQKKVGNIETLLIGSAAGAFSSSATFPLEVARKQMQLGALSGRQVYKDVFHALACIFEQEGIHGLYRGLAPSCMKLVPAAGISFMCYEACKRILLENDEED 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00617 391 ProSiteProfiles Solute carrier (Solcar) repeat profile. 295 383 IPR018108 -
Gma06g00617 391 ProSiteProfiles Solute carrier (Solcar) repeat profile. 201 285 IPR018108 -
Gma06g00617 391 PRINTS Mitochondrial carrier protein signature 112 125 IPR002067 GO:0055085
Gma06g00617 391 PRINTS Mitochondrial carrier protein signature 125 139 IPR002067 GO:0055085
Gma06g00617 391 PRINTS Mitochondrial carrier protein signature 165 185 IPR002067 GO:0055085
Gma06g00617 391 PRINTS Mitochondrial carrier protein signature 216 234 IPR002067 GO:0055085
Gma06g00617 391 PRINTS Mitochondrial carrier protein signature 258 276 IPR002067 GO:0055085
Gma06g00617 391 PRINTS Mitochondrial carrier protein signature 304 326 IPR002067 GO:0055085
Gma06g00617 391 SUPERFAMILY Mitochondrial carrier 108 379 IPR023395 -
Gma06g00617 391 Pfam Mitochondrial carrier protein 200 288 IPR018108 -
Gma06g00617 391 Pfam Mitochondrial carrier protein 109 191 IPR018108 -
Gma06g00617 391 Pfam Mitochondrial carrier protein 295 387 IPR018108 -
Gma06g00617 391 PANTHER ADENINE NUCLEOTIDE TRANSPORTER BT1, CHLOROPLASTIC/MITOCHONDRIAL 30 390 - -
Gma06g00617 391 PANTHER SOLUTE CARRIER FAMILY 25 30 390 - -
Gma06g00617 391 Gene3D Mitochondrial carrier domain 105 389 IPR023395 -
Gma06g00617 391 ProSiteProfiles Solute carrier (Solcar) repeat profile. 107 190 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00617 Gma-Chr6 5588515 5593141 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00617 1 390 Organic Solute Cotransporters AT4G32400 67.684 0.0 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00617 K14684 - gmx:100797663 726.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00617 06 5588515 5593141 Gma06g00617 06 5588515 5593141 ECH
Gma04g00629 04 5766858 5771010 Gma06g00617 06 5588515 5593141 GST
Gma17g01993 17 35741723 35745061 Gma06g00617 06 5588515 5593141 PCT
Gma14g01102 14 14999962 15002804 Gma06g00617 06 5588515 5593141 PCT
Gma06g00617 06 5588515 5593141 Gma17g01993 17 35741723 35745061 PCT
Gma06g00617 06 5588515 5593141 Gma14g01102 14 14999962 15002804 PCT