Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01912 ATGGAGTTGATGGGGTGTGGAAAGCTTAGGGGGTGCCTTGTTCTTGTGTTATTTGGTGCACTGTTGGTGGGTTTAGTGAGTGGAATTGGAATTAATTGGGGCACACAATTAACACACCCTTTGCCAGCATCCACTATAGTGAAAATGCTGAAGGACAATGGTATTCAGAAGGTTAAGCTTTTTGATGCTGACCCTGATATTCTAAATGCTCTTAAGAAGTCTGGGATTCAGGTGATGGTGGGTATACCAAATGACATGCTCTACACACTAGCTAACAGTATGCAAGCAGCTGAAAAATGGGTTTCCAAGAATGTTTCAGCACATGTCTCGGTGGACATCAGGTATGTTGCAGTGGGAAATGAACCTTTCTTGTCAACTTACAATGGTACCTTTGAAGCCACAACACTTCCAGCTCTTCAAAACATCCAATTAGCCCTTGTGAAAGCTGGTTTAGGCAATCAGGTTAAAGTCACTTGCCCTCTAAACGCTGACGTGTATCAGAGCGCACAAGTACCTTCTGATGGCGACTTCAGGCAAGACATCCATGATCTCATGGTGCAGATTGTCAAGTTCTTGAGCCAGAACAACGCTCCATTTACTGTGAACATCTATCCTTTCATCAGCCTCTATTCAGACCCCAATTTTCCTGTTGACTATGCCTTCTTCAATGGCTTTCAGTCTCCTATAAGTGACAACGGAAGGATCTATGACAATGTCTTTGACGCCAACCATGATACTCTAGTGTGGGCATTGCAGAAGAATGGTTTTGGAAACATGCCTATAATTGTGGGAGAAGTTGGGTGGCCTACAGATGGAGACAGAAATGCAAACCTTCAATATGCACAACGGTTTAACCAAGGTTTCATGTCGCGCTACATTGCCGGAAAGGGAACACCAATGAGGCCTGGTCCTATGGATGCTTACCTGTTTAGTCTCATAGATGAAGATTTCAAAAGCATTCAGCCGGGTAATTTTGAAAGACATTGGGGGTTGTTTTACTATGATGGACAACCCAAGTACCAGCTTAACATAGGATCAAGAGCCAATGGCTTAGTAGCTGCTACTGGGGTGGCATATCTGCCCAAAAAGTGGTGCATTTTGAAAACCTCAGCAAACCTCAATAGTGATCAAGTGGCACCAAGTGTGTCTTATGCTTGTCAAAATGCAGATTGCACAAGTCTTGGATATCAAACTTCATGTGGTGGTTTAGATATTCGTGGTAATATTTCTTATGCATTCAATAGCTACTTCCAAGTGAATGACCAGATTGACAGTGCATGCAAATTCCCTGGCCTTTCTGTTGTCACTGACAAAGATCCTTCAACTGGAGATTGCAAGTTCAAAATCATGATTCAGACAGATTCTGCTGGTCTACATGGGAATGGGAGAATTTGGTCTCTCAGAATAGTACTCTTTGTACTTTTGTTTTTCACTCTTATGTGA 1443 0.4276 MELMGCGKLRGCLVLVLFGALLVGLVSGIGINWGTQLTHPLPASTIVKMLKDNGIQKVKLFDADPDILNALKKSGIQVMVGIPNDMLYTLANSMQAAEKWVSKNVSAHVSVDIRYVAVGNEPFLSTYNGTFEATTLPALQNIQLALVKAGLGNQVKVTCPLNADVYQSAQVPSDGDFRQDIHDLMVQIVKFLSQNNAPFTVNIYPFISLYSDPNFPVDYAFFNGFQSPISDNGRIYDNVFDANHDTLVWALQKNGFGNMPIIVGEVGWPTDGDRNANLQYAQRFNQGFMSRYIAGKGTPMRPGPMDAYLFSLIDEDFKSIQPGNFERHWGLFYYDGQPKYQLNIGSRANGLVAATGVAYLPKKWCILKTSANLNSDQVAPSVSYACQNADCTSLGYQTSCGGLDIRGNISYAFNSYFQVNDQIDSACKFPGLSVVTDKDPSTGDCKFKIMIQTDSAGLHGNGRIWSLRIVLFVLLFFTLM 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01912 480 ProSitePatterns Glycosyl hydrolases family 17 signature. 259 272 IPR000490 GO:0004553|GO:0005975
Gma17g01912 480 Gene3D - 361 457 - -
Gma17g01912 480 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 5 16 457 - -
Gma17g01912 480 SUPERFAMILY (Trans)glycosidases 29 343 IPR017853 -
Gma17g01912 480 Pfam Glycosyl hydrolases family 17 29 343 IPR000490 GO:0004553|GO:0005975
Gma17g01912 480 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 16 457 IPR044965 GO:0004553|GO:0005975
Gma17g01912 480 Gene3D Glycosidases 28 350 - -
Gma17g01912 480 Pfam X8 domain 363 432 IPR012946 -
Gma17g01912 480 SMART X8_cls 363 447 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01912 Gma-Chr17 33378442 33383721 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01912 13 456 Glycoside Hydrolase AT4G31140 70.982 0.0 670
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01912 K19893 - gmx:100775918 973.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01912 17 33378442 33383721 Gma14g01176 14 18742275 18745799 GST
Gma17g01912 17 33378442 33383721 Gma06g01314 06 12326547 12328521 PCT
Gma04g00674 04 6244012 6258828 Gma17g01912 17 33378442 33383721 PCT
Gma06g00668 06 6054113 6069417 Gma17g01912 17 33378442 33383721 PCT