Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01314 ATGGCTCCAACCGAGTTCTTCATGTGGGGGCTATGTTTGATATTGGTCTTTGCTCATTACCAAGGTGCCCAAGGGGAAGAGTCTATACCAGGTCTTGGTATCAATTGGGGTGCATTAGCATCCCACACTTTGAATCCTAACGTAGTGGTGAATATGTTGAAGGACAACGGGATCAAGAAGGTGAAACTTTTTGATGCAGATTCTTGGACCCTGAGTGCTTTGTCTGGTACAGACATTGAAGTCATGGTAGGAATTCCTAATGATCAATTGAGTAAATTTGCTGGAAGTAGCGGAGATGCTGAAGCTTGGGTTAGAGAAAATCTCACCAAACATATTCATAATCATCATGGGAGCGTCAACATCAGACACGTATCTGTTGGAAATGAGCCATTCATGAAAGGTTACAAGGGTGCATATGTGAAGACCACATTCCCAGCAATGCAAAATATTCAAAAGGCCATCGACAAGGCTGGTCTTGGAGACACAGTGAAGGTGACAACGGCTTTGAATGCCGATGTTTACGAGTCTGCTTCAGACAAGCCATCAGATGGAGATTTTCGGAGTGACATTTACGATGCCATAAAACAAATACTAAGTTTGCTTCACGAAAGGAACTCACCATTTCTTGTCAACATATACCCTTTCCTCAGTCTCTACCAGAACGACAATTTTCCTGAAGAATTTGCATTCTTTGATGGTCAAGGCAGAACAATTCAAGACAAAGATGCACAATACAGCAATGTCTATGATGCAAATTTGGACACCCTTGTTTGGTCATTGAGAAAAGCTGGCTACCCTGACTTGAGAATTGTGGTTGGTGAAATTGGATGGCCAACTGATGGCAACAAAAATGCTAATAACTACAATGCAAAAAGGTTCTACCAAGGACTACTCAAGAAAATGGTACACAAGAAAGGAACTCCTCTTCGCCCCGGAGCCATGGAGATGTATCTGTTTTCTCTTACTGATGAGAACTTGAAGAGCATTGAGCCTGGCAACTTTGAGCGTCATTGGGGAATTTTTGGCTACGACGGAAGGCCTAAGTTTCCCATTGATTTTTCTGGTCAGGGACAGGACAAATGGCCAGTGGCAGCCAAAGGTGTTGTTTACCAAGAACGTCAATGGTGTGTCCTAAGTAGTGATGTTAAGAACTTGAGTTTGGTGCCAAGTGCATTGGACTATGCTTGTGCTGGTGCTGATTGCACAAGCTTAGGATTTGGTTGTTCTTGTGATAAGTTAGACCTTGCTGGCAATGcttcatttgctttcaaccaatattttcaaacaagggaccaaagtgttgaggcgtgtgatttcaatggaatgggaactattgtgaaacaggatccatcaaagGGAAGTTGCTTGTTCCCTATAGAAATTGAGAGCAGTGGTGACATGGTTAGAGCAATGCGTGCGATTGGAAGCATTTTGATTGGATTGGCATTGTTTTTCGTAACATTTACGTAG 1470 0.4 MAPTEFFMWGLCLILVFAHYQGAQGEESIPGLGINWGALASHTLNPNVVVNMLKDNGIKKVKLFDADSWTLSALSGTDIEVMVGIPNDQLSKFAGSSGDAEAWVRENLTKHIHNHHGSVNIRHVSVGNEPFMKGYKGAYVKTTFPAMQNIQKAIDKAGLGDTVKVTTALNADVYESASDKPSDGDFRSDIYDAIKQILSLLHERNSPFLVNIYPFLSLYQNDNFPEEFAFFDGQGRTIQDKDAQYSNVYDANLDTLVWSLRKAGYPDLRIVVGEIGWPTDGNKNANNYNAKRFYQGLLKKMVHKKGTPLRPGAMEMYLFSLTDENLKSIEPGNFERHWGIFGYDGRPKFPIDFSGQGQDKWPVAAKGVVYQERQWCVLSSDVKNLSLVPSALDYACAGADCTSLGFGCSCDKLDLAGNASFAFNQYFQTRDQSVEACDFNGMGTIVKQDPSKGSCLFPIEIESSGDMVRAMRAIGSILIGLALFFVTFT 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01314 489 Gene3D Glycosidases 31 360 - -
Gma06g01314 489 SUPERFAMILY (Trans)glycosidases 32 353 IPR017853 -
Gma06g01314 489 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE-LIKE PROTEIN 4 471 - -
Gma06g01314 489 Pfam X8 domain 374 444 IPR012946 -
Gma06g01314 489 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 4 471 IPR044965 GO:0004553|GO:0005975
Gma06g01314 489 SMART X8_cls 374 457 IPR012946 -
Gma06g01314 489 Pfam Glycosyl hydrolases family 17 32 353 IPR000490 GO:0004553|GO:0005975
Gma06g01314 489 Gene3D - 368 464 - -
Gma06g01314 489 ProSitePatterns Glycosyl hydrolases family 17 signature. 268 281 IPR000490 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01314 Gma-Chr6 12326547 12328521 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01314 29 469 Miscellaneous Gene Families AT5G64790 56.009 0.0 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01314 - - gmx:100794658 1007.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01912 17 33378442 33383721 Gma06g01314 06 12326547 12328521 PCT
Gma14g01176 14 18742275 18745799 Gma06g01314 06 12326547 12328521 PCT