Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01877 ATGCAACCCCGGCTGAGCTCGAGAATCAATTTGGTCGAGTTGAAAGCGCTGATTGTGAAGAGGATTGGAGCGGATAAGTCGAAGCGGTACTTCTATTACTTGAACAAGTTTCTGAGTCAGAAGCTGAGCAAGACCGAATTCGACAGGTCATGTTACCGTGTACTTGGCAGGGAGAATCTTCCGTTACACAATCACTTTATAAAGTCAATTTTGAAGAATGCCTGCCAAGCCAAGACCCCACCGCCAGTTCAGCTGATAGGCCCTCCAAAATCAGGAGCACTTGTCAATAATGTATCTCCTGGTAGAGAGGATGGGCATGAACAGAGTGTCGCTAACTTCCAAAATCAGAATACTTCCATTTGGTCCAATGGGGTTTTGCCGGTTTCCCCACGTAAGTCAAGATCTGGAGTGCGTGATCGGAAGCTTAAAGATAGACCGAGCCCTCTTGGACCAAATGGAAAAGTTGATTCTGTTGCTCATCAATCCACAGCTACAGAAGACAGTGGTAGTAAGGTTGATATGGAGAATGGAATCCTTACTCCATGCGATTATCAGAGACCAATGCAGCATCTTCAGGCAGTTGATGAGCTACCTGAGAATGGTATGGGGGATGTTATTCAAAGACCTGCGGAAAAACCAAGAATGCATGGTAAAGGGCCAACCGAAGTATCAATTGTTGAAGATGGGGAAGAGGTGGAGCAGTTAAACCACCTCAATTTCTCTAGAAGTCCCTTGATAGCACCACTTGGGATTCCTTACTGCACTGCAAGTGTTGGTGGGGCCCGCAAGGCATTGACGGTGAATAGCACTGGTGATTTTGTTAGTTGTTGTGACAGTGGTAGGTTATCTGATACAGATACATTGAGAAGGCGCATGGAGCAGATCGCAACAGTTCAGGGTCTTGGAGGTGTTTCTACAGAATGTGCAAATATGTTGAATAATGTGTTAGATGTGTACTTGAAACGGTTGATAAGGTCTTGTGTTGATTTAGTGGGAGCTAGGTCTGGAAATGAGCCGAGGAAGCTCCCTGTCTCAAAACAGCAGATTCAGGGGAAGGTCATTAATGGCGTCTGGCCAAATAACCATTTACATGTGCAGAGTGCTGGAGGGATGGCAGAACCCGAACCCGAGCCCGAACACAGACCACCGCGCACAGTATCTTTACATGATTTTAAAGTTGCTATGGAGCTAAATCCACAGCAACTTGGAGAAGATTGGCCACTTCAGCTGGAGAAAATCTCTATGCAATCATTTGATGAATAA 1263 0.4576 MQPRLSSRINLVELKALIVKRIGADKSKRYFYYLNKFLSQKLSKTEFDRSCYRVLGRENLPLHNHFIKSILKNACQAKTPPPVQLIGPPKSGALVNNVSPGREDGHEQSVANFQNQNTSIWSNGVLPVSPRKSRSGVRDRKLKDRPSPLGPNGKVDSVAHQSTATEDSGSKVDMENGILTPCDYQRPMQHLQAVDELPENGMGDVIQRPAEKPRMHGKGPTEVSIVEDGEEVEQLNHLNFSRSPLIAPLGIPYCTASVGGARKALTVNSTGDFVSCCDSGRLSDTDTLRRRMEQIATVQGLGGVSTECANMLNNVLDVYLKRLIRSCVDLVGARSGNEPRKLPVSKQQIQGKVINGVWPNNHLHVQSAGGMAEPEPEPEHRPPRTVSLHDFKVAMELNPQQLGEDWPLQLEKISMQSFDE 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01877 420 MobiDBLite consensus disorder prediction 133 147 - -
Gma17g01877 420 Pfam Transcriptional regulator of RNA polII, SAGA, subunit 6 331 IPR024738 GO:0070461
Gma17g01877 420 MobiDBLite consensus disorder prediction 156 170 - -
Gma17g01877 420 MobiDBLite consensus disorder prediction 121 174 - -
Gma17g01877 420 PANTHER TRANSCRIPTIONAL REGULATOR OF RNA POLII, SAGA, SUBUNIT 1 420 - -
Gma17g01877 420 PANTHER TRANSCRIPTIONAL ADAPTER 1 1 420 IPR024738 GO:0070461
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01877 Gma-Chr17 32515984 32517246 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01877 - - gmx:100803746 839.336
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01877 17 32515984 32517246 Gma14g01219 14 19789066 19791698 GST
Gma17g01877 17 32515984 32517246 Gma04g00686 04 6397346 6398605 PCT
Gma17g01877 17 32515984 32517246 Gma06g00680 06 6173866 6175647 PCT
Gma04g00686 04 6397346 6398605 Gma17g01877 17 32515984 32517246 PCT
Gma06g00680 06 6173866 6175647 Gma17g01877 17 32515984 32517246 PCT