Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00686 ATGCAACCCCAGCAGAGCTCAAGAATTGATTTGGGTGAATTGAGAGCACAGATTGTAAAGAAGCTTGGAGCGGATAAGTCGAAGCGTTACTTTTATTACTTGAACAGGTTTTTGAGTCAGAAGTTGAGCAAGACTGAGTTTGATAAGTTATGTTTTCGAGTTCTTGGGAGGGAGAATCTTCCATTGCACAACCATTTTATAAAGTCAATTTTGAAGAATGCCTGTCAAGCCAAGACCCCACCACCAATCCATCCGCCAGATCCCCTGAAGTCTGGAGAACATGCTTCAGACATGTCTCCTGGCAGGGAAGATGGGCATGAACACAGTGTTGCCAGCTTCCAAAATCAAAGTCAGAAAGCACCCGTTTGGTCAAATGGGTTTTTGCCGGCATCCCCTAAGGTTAGGTCTGGAGTACGTGAACGGAAGCTGAGAGATAGGCCAAGCCCTCTTGGACCAAATGGGAAGGTTGATTCTGTTTCTCACCAAATCATGGGTACAGAAGACTGTGGTAGTAAGGTTGACATGGAGAATGGAATTCGTTCTCCATGTGATTACCAGAGACCAATACAGCATCTTCAAGCTGTTGCTGAGCTACCTGAGAATGAAAGGGGAGATGTTGTTCAGAAACCTGCAGAAAAACCAAGAATACACGGGAAAGGGCCGGCTGAAATGTCAATTGTTGAAGACGGGGAAGAAGTGGATCAGTTAAGTCGCCTGGGTTTCTCTAGAAGTCCCTTGATAGCACCACTTGGGATTCCTTACTGCTCAGCAAGTGTAGGGGGAGCCCGCAAAACATTGCCAGTGAGTAGTGCTGGTGATTTTGATAGCTGTTGTGACAGTGGTAGGTTGTCTGATACAGATACACTGCGGAGGCGCATGGAGCAGATTGCTGCAGTACAAGGTCTTGGAGCTGTTTCTATGGAATGTGCAAATATGTTGAATAGTATGTTGGATGTGTACTTGAAACGGTTGATCAGGTCCTGTGTTGAATTAGTTGGAACTAGGTCTACAAATGAGCTGAGGAAGCCCCTTGCCCCCAAACAGCAGATGCAGGGTAAGGTCATCAACGACATGTGGCCAAATAATCATTTACATGTGCAGTGTGCTGGTGGGTCAGCAGAAGCTGTGCCTGAACACAGACCACCATGCTCAGTTTCTTTGCATGATTTTAAAGTTGCCATGGAACTAAATCCACGGCAACTTGGAGAAGATTGCCCTCTGCTATTGGAGAAAATATCCATGCAATCGTTTGAGGAATAA 1260 0.4579 MQPQQSSRIDLGELRAQIVKKLGADKSKRYFYYLNRFLSQKLSKTEFDKLCFRVLGRENLPLHNHFIKSILKNACQAKTPPPIHPPDPLKSGEHASDMSPGREDGHEHSVASFQNQSQKAPVWSNGFLPASPKVRSGVRERKLRDRPSPLGPNGKVDSVSHQIMGTEDCGSKVDMENGIRSPCDYQRPIQHLQAVAELPENERGDVVQKPAEKPRIHGKGPAEMSIVEDGEEVDQLSRLGFSRSPLIAPLGIPYCSASVGGARKTLPVSSAGDFDSCCDSGRLSDTDTLRRRMEQIAAVQGLGAVSMECANMLNSMLDVYLKRLIRSCVELVGTRSTNELRKPLAPKQQMQGKVINDMWPNNHLHVQCAGGSAEAVPEHRPPCSVSLHDFKVAMELNPRQLGEDCPLLLEKISMQSFEE 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00686 419 MobiDBLite consensus disorder prediction 77 111 - -
Gma04g00686 419 MobiDBLite consensus disorder prediction 135 159 - -
Gma04g00686 419 PANTHER TRANSCRIPTIONAL ADAPTER 1 1 419 IPR024738 GO:0070461
Gma04g00686 419 MobiDBLite consensus disorder prediction 195 219 - -
Gma04g00686 419 Pfam Transcriptional regulator of RNA polII, SAGA, subunit 4 332 IPR024738 GO:0070461
Gma04g00686 419 PANTHER TRANSCRIPTIONAL REGULATOR OF RNA POLII, SAGA, SUBUNIT 1 419 - -
Gma04g00686 419 MobiDBLite consensus disorder prediction 202 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00686 Gma-Chr4 6397346 6398605 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00686 - - gmx:100799736 854.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00686 04 6397346 6398605 Gma06g00680 06 6173866 6175647 GST
Gma17g01877 17 32515984 32517246 Gma04g00686 04 6397346 6398605 PCT
Gma14g01219 14 19789066 19791698 Gma04g00686 04 6397346 6398605 PCT
Gma04g00686 04 6397346 6398605 Gma17g01877 17 32515984 32517246 PCT
Gma04g00686 04 6397346 6398605 Gma14g01219 14 19789066 19791698 PCT