Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01808 ATGGTGAATTCCATGGTGGAACGCGCCACGAGCGACATGCTCATAGGGCCTGATTGGGCCATGAACATCGAGATCTGCGACATGCTCAATCATGACCCTGGGCAAGCAAAGGATGTTGTTAAAGGTATAAAGAAGCGGATTGGAAGTAAAAATTCAAAAGTTCAACTTCTTGCACTAACTTTGTTGGAGACAATCATAAAGAACTGTGGAGATATTGTTCACATGCATGTTGCAGAAAGAGATGTGCTTCATGAGATGGTGAAAATAGTAAAGAAAAAGCCTGATTTTCATGTCAAAGAAAAGATACTGGTTCTTGTAGATACTTGGCAAGAAGCTTTTGGAGGCCCAAGGGCAAGATATCCACAATATTATGCTGCATACCAGGAACTGTTGCGTGCTGGGGCAGTATTCCCTCAGAGGTCGGAACAATCTGCACCTGTATTCACACCTCCACAAACACAGCCATTGGCATCTTACCCTCAAAATATACGCGACACAAATGTTGACCAGGACGCAGCTCAGTCCTCTGCAGAGTCTGAGTTTCCAACACTCAATTTGACTGAAATTCAGAATGCACGTGGCATCATGGATGTTCTTGCAGAAATGCTCAATGCCTTAGACCCTAGTAACAAAGAAGGGATTAGACAGGAGGTTATTGTTGATTTGGTGGAGCAGTGTCGAACTTACAAGCAGAGAGTGGTTCACCTTGTCAACTCAACTTCGGATGAATCACTGCTATGCCAAGGACTAGCCCTGAATGATGATCTTCAGCGTGTACTGGCCAAGCACGAATCTATTTCTTCTGGAATTTCTACCAAAAACGAAAATCACACTGAGAATTTGAATCCTTCACTTGCACCTGCTGGAGCTCTTGTAGACATTGATGCTCCTTTGGTTGATACTGGAGATACTAGCAAACAAACTGATGGGAGATCCTCTTCTAATGTTGAAGCAGGGTCCCAAACATTGAATCAGTTACTACTTCCTGCACCTCCAACTTCTAATGGTTCAACAATTCCTGCCAAGGTTGATCCCAAATGGGACCTGCTCAGTGGCGATGACTATAACTCACCAAAAGCGGATTCATCAAATGCTCTTGTTCCTCTAGGAGAACAACCAACTGCCAGTCCTGTTTCTCAGCAGAATGCCCTTGTTCTTTTTGATATGTTTTCTAATGGAAATAATGCACCTACATCTGTCAATTCCCAGCCACCCCATCCAGCTaatgttgctggccaaaccagtccatatgctccccaatttcaacaacagcaaACAGTCACATCTCAAGGTGGATTTTACCCCAATGGAAATGCCCCAAATGCAGGTTCACCTCAGCAGTATGAGCAATCATTGTATACACAAAATACAGGTCCTGCCTGGAATGGTCAGGTTGCCCAACAGCAACAGCAACAACCACCTTCACCTGTTTATGGCACACAAAGTGGATCATTGCCACCACCTCCTTGGGAAGCTCAACCAGCAGCAGATAATGGAAGTCCATTAGCGGGCGCTCAGTATCCACACATGCAGAATTCTGGACATCCTATGGGGCCTCAAACAATGGGCAATGACCAGGGTGTTGGTATGTATATGCAGCCAAATGCTAACAGCCATATGTCAGGAATGAATAACCATGTTGGGAGCAATCAAATGGGCTTGCAACCTCAGCATATGCAAGGTGTTGCAGGACCCTACATGGGCATGGCTCCACATCAAATGCAGGGTGGTCCTGTGATGTATCCTCAACAGATGTACGGAAACCAATTTATGGGATACGGCTATGATCAACGACAAGGAGTTCATTATCAGCAACAAGGAGTTCCATATATTGAACGGCAAATGTATGGTATGTCTGTTAGAGACGATAGTAGTTTGAGAAACCCTTACCAAGCTTCTACCACATCGTATGCTCCATCTGGGAAGCCTTCCAAGCCAGAGGATAAGTTATTTGGAGACCTTGTTGACATGGCAAAAGTGAAGCCAAAACCCACTCCAGGCCGAGCTGGCGCAGAAATTGGAGATCCATGCCATTTTCCTTCTTTCATCGAGTCATTAAGTGAGGATCACCGAATGGGATTGGAATGGGTTGGAGCACCATTGGAACGTGACACACTAATGGCATGTATCACGAGCTGGTCATGGTAG 2148 0.4409 MVNSMVERATSDMLIGPDWAMNIEICDMLNHDPGQAKDVVKGIKKRIGSKNSKVQLLALTLLETIIKNCGDIVHMHVAERDVLHEMVKIVKKKPDFHVKEKILVLVDTWQEAFGGPRARYPQYYAAYQELLRAGAVFPQRSEQSAPVFTPPQTQPLASYPQNIRDTNVDQDAAQSSAESEFPTLNLTEIQNARGIMDVLAEMLNALDPSNKEGIRQEVIVDLVEQCRTYKQRVVHLVNSTSDESLLCQGLALNDDLQRVLAKHESISSGISTKNENHTENLNPSLAPAGALVDIDAPLVDTGDTSKQTDGRSSSNVEAGSQTLNQLLLPAPPTSNGSTIPAKVDPKWDLLSGDDYNSPKADSSNALVPLGEQPTASPVSQQNALVLFDMFSNGNNAPTSVNSQPPHPANVAGQTSPYAPQFQQQQTVTSQGGFYPNGNAPNAGSPQQYEQSLYTQNTGPAWNGQVAQQQQQQPPSPVYGTQSGSLPPPPWEAQPAADNGSPLAGAQYPHMQNSGHPMGPQTMGNDQGVGMYMQPNANSHMSGMNNHVGSNQMGLQPQHMQGVAGPYMGMAPHQMQGGPVMYPQQMYGNQFMGYGYDQRQGVHYQQQGVPYIERQMYGMSVRDDSSLRNPYQASTTSYAPSGKPSKPEDKLFGDLVDMAKVKPKPTPGRAGAEIGDPCHFPSFIESLSEDHRMGLEWVGAPLERDTLMACITSWSW 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01808 715 ProSiteProfiles GAT domain profile. 180 268 IPR004152 GO:0035091|GO:0043130
Gma17g01808 715 Gene3D - 183 275 IPR038425 -
Gma17g01808 715 PANTHER TARGET OF MYB PROTEIN 1 1 666 - -
Gma17g01808 715 SUPERFAMILY ENTH/VHS domain 3 138 IPR008942 -
Gma17g01808 715 MobiDBLite consensus disorder prediction 299 318 - -
Gma17g01808 715 CDD VHS 2 132 - -
Gma17g01808 715 CDD GAT_GGA_like_plant 188 266 - -
Gma17g01808 715 Pfam GAT domain 194 268 IPR004152 GO:0035091|GO:0043130
Gma17g01808 715 SMART VHS_2 2 134 IPR002014 GO:0035091|GO:0043130
Gma17g01808 715 Gene3D - 1 135 IPR008942 -
Gma17g01808 715 MobiDBLite consensus disorder prediction 622 649 - -
Gma17g01808 715 MobiDBLite consensus disorder prediction 350 375 - -
Gma17g01808 715 PANTHER TOM1-LIKE PROTEIN 1 666 IPR044836 GO:0035091|GO:0043130|GO:0043328
Gma17g01808 715 MobiDBLite consensus disorder prediction 301 318 - -
Gma17g01808 715 MobiDBLite consensus disorder prediction 356 375 - -
Gma17g01808 715 SUPERFAMILY GAT-like domain 141 268 - -
Gma17g01808 715 MobiDBLite consensus disorder prediction 395 479 - -
Gma17g01808 715 MobiDBLite consensus disorder prediction 480 494 - -
Gma17g01808 715 Pfam VHS domain 3 129 IPR002014 GO:0035091|GO:0043130
Gma17g01808 715 ProSiteProfiles VHS domain profile. 9 138 IPR002014 GO:0035091|GO:0043130
Gma17g01808 715 MobiDBLite consensus disorder prediction 624 641 - -
Gma17g01808 715 MobiDBLite consensus disorder prediction 395 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01808 Gma-Chr17 28058874 28079987 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01808 - - gmx:732580 1323.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01808 17 28058874 28079987 Gma17g01808 17 28058874 28079987 ECH
Gma17g01808 17 28058874 28079987 Gma14g01312 14 25482910 25509136 GST
Gma06g00732 06 6619747 6626370 Gma17g01808 17 28058874 28079987 PCT