Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g01312 ATGGTGAATTCCATGGTGGAACGCGCTACGAGCGACATGCTCATAGGGCCCGATTGGGCCATGAACATCGAGATCTGCGACATGCTCAATCACGACCCTGGGCAAGCAAAGGATGTTGTTAAAGGCATAAAGAAGCGGATTGGAAGTAAAAATTCAAAAGTCCAACTTCTTGCACTAACTTTGTTGGAGACAATCATAAAGAACTGCGGAGATATTGTTCACATGCATGTTGCAGAAAGAGATGTGCTTCATGAGATGGTGAAAATAGTAAAGAAAAAGCCTGATTTTCATGTCAAAGAGAAGATACTGATTCTTATAGATACTTGGCAAGAAGCTTTTGGAGGCCCGAGGGCAAGATATCCACAATATTATGCTGCTTACCAGGAACTGTTGCGTGCTGGGGCAGTATTCCCTCAGAGGTCTGAACAATCTGCACCTGTTTTCACACCTCCACAAACACAGCCATTGGCATCATACCCTCAAAATATACACGACTCAGATGCTCACCAGGACACAGCTCAGTCCTCTGCAGAGTCCGAGTTTCCAACGCTTAATTTGACTGAAATTCAGAATGCACGGGGCATCATGGATGTTCTTGCAGAAATGCTCAATGCCTTAGACCCTAGTAACAAAGAAGGGATTAGACAGGAGGTTATTGTTGATTTGGTGGAGCAGTGTCGAACTTACAAGCAGAGAGTGGTACACCTTGTCAACTCAACTTTGGATGAATCACTGCTATGCCAAGGACTAGCCCTGAATGATGATCTTCAGCGTGTACTGGCTAAGCACGAATCTATTTCTTCTGGAACTTCTACCAAAAATGAAAATCACACACAGAATTCGAAACCTGCACCTGCTGGGGCTCTTGTAGATATTGATGCTCCTTTGGTTGATACTGGAGATACTAGCAAACAAACTGATGGGAGATCCTCTTCTAATGTCGAAGCAGGGTCCCAAACACTGAATCAGTTACTGCTTCCTGCACCTCCAACTTCTAATGGATCAACAATTCCTGCCAAGGTTGATCCCAAATGGGATCTGCTCAGTGGCGATGACTATAACTCACCAAAAGCAGATTCATCAAATGTTCTTGTTCCTCTAGGAGAACAACCACCTGCCAGTCCTGTTTCTCAGCAGAATGACCTTGTTCTTTTTGATATGTTTTCTAATGGAAATAATGCACCTACATCTGTCAACTCCCAGCCACCCCAGCCAACTAATGTTGCTGGCCAAACCAGTCCATATGGTCCTCAATTTCAACAACAGCAAACAGTCGTCACATCTCAAGGTGGATTTTACCCCAATGGAAATGCCCCAAATGCAGGTTCACCTCAGTATGAGCAATCACTGTATACACAAAGTACAGGTCCTGCCTGGAATGGTCAGGTTGCACAACAGCAACAGCAACAGCAACAACCACCTTCTCCTGTTTATGGTTCACAAGGCAGTGGATCATTGCCACCTCCTCCCTGGGAAGCTCAACCAGCCGATAATGGAGGTCCATTAGCGGGAACTCAGTATCCACACATGCAGAATGCTGGACATCCGATGGGGCCTCAAACAATGGGCAATGACCAGGGTGTTGGTATGTATATGCAGTCAAATGCTAATAGCCATACGTCAGGAATGAATAACCATGTTGGGAGCAATCAAATGGGCTTGCAACCTCAGCATGTGCAAGGTGTTGCAGGACCCTACATGGGTCTGGCTCCACATCAAATGCAGGGTGGTCCTGTGATGTATTCTCAACAAATGTACGGAAACCAATTTATAGGATACGGCTATGATCAGCAACAAGGAGTTCATTATCAGCAACTAGGAGTTCCATATATTGAACGGCAAATGTATGGTATGTCTGTTAGAGACGATAGTAGTTTGAGAAACCCTTACCAAGCTTCTACCACATCTTATGTTCCCTCTGGGAAGCCTTCCAAGCCAGAGGATAAGTTATTTGGAGACCTTGTTGACATGGCAAAAGTGAAGCCCAAACCCACTCCTGGCCGAGCTGGTAGCATGTAA 2019 0.4527 MVNSMVERATSDMLIGPDWAMNIEICDMLNHDPGQAKDVVKGIKKRIGSKNSKVQLLALTLLETIIKNCGDIVHMHVAERDVLHEMVKIVKKKPDFHVKEKILILIDTWQEAFGGPRARYPQYYAAYQELLRAGAVFPQRSEQSAPVFTPPQTQPLASYPQNIHDSDAHQDTAQSSAESEFPTLNLTEIQNARGIMDVLAEMLNALDPSNKEGIRQEVIVDLVEQCRTYKQRVVHLVNSTLDESLLCQGLALNDDLQRVLAKHESISSGTSTKNENHTQNSKPAPAGALVDIDAPLVDTGDTSKQTDGRSSSNVEAGSQTLNQLLLPAPPTSNGSTIPAKVDPKWDLLSGDDYNSPKADSSNVLVPLGEQPPASPVSQQNDLVLFDMFSNGNNAPTSVNSQPPQPTNVAGQTSPYGPQFQQQQTVVTSQGGFYPNGNAPNAGSPQYEQSLYTQSTGPAWNGQVAQQQQQQQQPPSPVYGSQGSGSLPPPPWEAQPADNGGPLAGTQYPHMQNAGHPMGPQTMGNDQGVGMYMQSNANSHTSGMNNHVGSNQMGLQPQHVQGVAGPYMGLAPHQMQGGPVMYSQQMYGNQFIGYGYDQQQGVHYQQLGVPYIERQMYGMSVRDDSSLRNPYQASTTSYVPSGKPSKPEDKLFGDLVDMAKVKPKPTPGRAGSM 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g01312 672 ProSiteProfiles VHS domain profile. 9 138 IPR002014 GO:0035091|GO:0043130
Gma14g01312 672 SMART VHS_2 2 134 IPR002014 GO:0035091|GO:0043130
Gma14g01312 672 MobiDBLite consensus disorder prediction 299 316 - -
Gma14g01312 672 MobiDBLite consensus disorder prediction 526 547 - -
Gma14g01312 672 MobiDBLite consensus disorder prediction 265 283 - -
Gma14g01312 672 Gene3D - 183 275 IPR038425 -
Gma14g01312 672 CDD VHS 2 132 - -
Gma14g01312 672 MobiDBLite consensus disorder prediction 388 482 - -
Gma14g01312 672 CDD GAT_GGA_like_plant 188 266 - -
Gma14g01312 672 Pfam VHS domain 3 129 IPR002014 GO:0035091|GO:0043130
Gma14g01312 672 Pfam GAT domain 194 268 IPR004152 GO:0035091|GO:0043130
Gma14g01312 672 MobiDBLite consensus disorder prediction 622 649 - -
Gma14g01312 672 MobiDBLite consensus disorder prediction 388 547 - -
Gma14g01312 672 Gene3D - 1 135 IPR008942 -
Gma14g01312 672 MobiDBLite consensus disorder prediction 157 180 - -
Gma14g01312 672 PANTHER TARGET OF MYB PROTEIN 1 1 666 - -
Gma14g01312 672 MobiDBLite consensus disorder prediction 265 289 - -
Gma14g01312 672 ProSiteProfiles GAT domain profile. 180 268 IPR004152 GO:0035091|GO:0043130
Gma14g01312 672 SUPERFAMILY GAT-like domain 141 269 - -
Gma14g01312 672 MobiDBLite consensus disorder prediction 297 316 - -
Gma14g01312 672 PANTHER TOM1-LIKE PROTEIN 1 666 IPR044836 GO:0035091|GO:0043130|GO:0043328
Gma14g01312 672 SUPERFAMILY ENTH/VHS domain 3 138 IPR008942 -
Gma14g01312 672 MobiDBLite consensus disorder prediction 624 641 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g01312 Gma-Chr14 25482910 25509136 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g01312 - - gmx:100809022 1327.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g01312 14 25482910 25509136 Gma14g01312 14 25482910 25509136 ECH
Gma17g01808 17 28058874 28079987 Gma14g01312 14 25482910 25509136 GST
Gma06g00732 06 6619747 6626370 Gma14g01312 14 25482910 25509136 PCT