Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01417 ATGGCACTTCCCCTTCTTCGAATCCCCGGGATTCCACTTGCCAAGCAACACCAATCATTCCCTTCCAATACCCGCCGCAAAGCCACGACGGCGCAGGCGGAGCTCGAGACAGCGGTGGCGCGGACGGGCGGAACCGGTTACCAGTCTCCGTCCGTCGATGTTCCCACGCATAAGGTCATAGTCCACGACAGACAACGAGGAATCGTTCACGAATTCGTCGTGCCTGAGGACCAGTATATATTACATACTGCTGAGGCCCAGAATATTACCCTTCCATTCGCCTGCAGGCATGGTTGTTGTACTAGCTGTGCTGTACGTATAAAGAATGGAAAGATTAGGCAACCAGAGGCACTAGGGATATCGGCCGAATTGAGAGACAAGGGTTATGCACTTCTTTGTGTGGGCTTCCCAACCTCTGATGTTGAAGTGGAAACTCAAGATGAAGATGAGGTATATTGGCTTCAATTTGGACGTTATTTTGCTCGAGGACCAGTGGAAAGAGATGACTATGCCTTGGAGTTGGCCATGGCTGACGAGTAA 540 0.513 MALPLLRIPGIPLAKQHQSFPSNTRRKATTAQAELETAVARTGGTGYQSPSVDVPTHKVIVHDRQRGIVHEFVVPEDQYILHTAEAQNITLPFACRHGCCTSCAVRIKNGKIRQPEALGISAELRDKGYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPVERDDYALELAMADE 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01417 179 PANTHER FERREDOXIN C 2, CHLOROPLASTIC 19 164 - -
Gma17g01417 179 SUPERFAMILY 2Fe-2S ferredoxin-like 53 157 IPR036010 GO:0051536
Gma17g01417 179 ProSiteProfiles 2Fe-2S ferredoxin-type iron-sulfur binding domain profile. 57 149 IPR001041 GO:0051536
Gma17g01417 179 TIGRFAM fdx_plant: ferredoxin [2Fe-2S] 58 152 IPR010241 GO:0009055|GO:0022900|GO:0051537
Gma17g01417 179 CDD fer2 59 144 IPR001041 GO:0051536
Gma17g01417 179 Pfam 2Fe-2S iron-sulfur cluster binding domain 70 137 IPR001041 GO:0051536
Gma17g01417 179 PANTHER FERREDOXIN 19 164 - -
Gma17g01417 179 Gene3D - 54 159 IPR012675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01417 Gma-Chr17 13308705 13313301 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01417 K02639 - gmx:100782906 359.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01417 17 13308705 13313301 Gma17g01417 17 13308705 13313301 ECH
Gma17g01417 17 13308705 13313301 Gma05g01131 05 32237028 32244016 GST