Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01131 ATGGCACTTCCCCTTCTTCGAATCCCCGGCATGCCACTCACCAACCAACACCAATCATTCCCTTCCAATACCCGCCGCAAAGCCACGACGGCGAAGGCGGAGCTCGGGACGGCGGTGGCGCGGACGGGCGGAGCCGGTTACCAATCTCCGTCCGTCGACGTTCCCACGCATAAGGTCACAGTCCACGACAGACAACGAGGAATCGTTCACGAGTTCGTCGTGCCTGAGGACCAGTATATATTACATACTGCTGAGGCCCAGAATATTACCCTTCCATTCGCCTGCAGGCATGGTTGTTGTACTAGCTGTGCTGTACGTATAAAGAAGGGACAAATTAGGCAACCAGAGGCACTTGGGATATCTGCCGAATTGAGAGACAAGGGTTATGCACTTCTTTGTGTGGGCTTCCCGACCTCTGATGTTGAAGTGGAAACTCAAGATGAAGATGAGGTATATTGGCTTCAATTTGGACGTTATTTTGCCCGAGGACCAGTG 495 0.5293 MALPLLRIPGMPLTNQHQSFPSNTRRKATTAKAELGTAVARTGGAGYQSPSVDVPTHKVTVHDRQRGIVHEFVVPEDQYILHTAEAQNITLPFACRHGCCTSCAVRIKKGQIRQPEALGISAELRDKGYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPV 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01131 165 Pfam 2Fe-2S iron-sulfur cluster binding domain 70 137 IPR001041 GO:0051536
Gma05g01131 165 SUPERFAMILY 2Fe-2S ferredoxin-like 50 157 IPR036010 GO:0051536
Gma05g01131 165 ProSiteProfiles 2Fe-2S ferredoxin-type iron-sulfur binding domain profile. 57 149 IPR001041 GO:0051536
Gma05g01131 165 PANTHER FERREDOXIN C 2, CHLOROPLASTIC 19 159 - -
Gma05g01131 165 Gene3D - 54 159 IPR012675 -
Gma05g01131 165 CDD fer2 59 144 IPR001041 GO:0051536
Gma05g01131 165 TIGRFAM fdx_plant: ferredoxin [2Fe-2S] 57 152 IPR010241 GO:0009055|GO:0022900|GO:0051537
Gma05g01131 165 PANTHER FERREDOXIN 19 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01131 Gma-Chr5 32237028 32244016 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01131 K02639 - gmx:100791128 333.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01131 05 32237028 32244016 Gma05g01131 05 32237028 32244016 ECH
Gma17g01417 17 13308705 13313301 Gma05g01131 05 32237028 32244016 GST