Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01401 ATGGCCTGCTTAGAAGTCAGCAAAGAGGTAAAGTTCAAAGGTGACACGGAAGAACTCACTCTTGATGGAAGTGTTGATTGGCATGGTCGCCCTGCAATTAGAGCCAAATCTGGCAGATGGGTTGCTGGAACCATCGTTCTATTGAACCAAGGTCTGGCAACCTTAGCATTCTTTGGAGTAGGGGTGAACCTAGTGCTGTTCCTGACAAGAGTGATGGGGCAAGATAATGCTGAAGCTGCAAACAATGTGAGCAAGTGGACTGGCACAGTTTACATCTTCTCTCTTGTGGGTGCTTTCCTAAGTGATTCGTATTGGGGAAGATACAAAACTTGTGCCATCTTTCAGGTCATCTTTGTAATAGGTCTAGTATCCTTGTCTCTTTCATCATACCTCTCCTTGATTAGGCCTAAAGGTTGTGGGAATGAAACAATTCCATGTGGGAAACATTCAAGCTTGGAGATGGGGATGTTCTACCTCTCAATCTATCTTATTGCTTTAGGGAATGGAGGGTATCAACCAAATATTGCCACATTTGGAGCTGATCAGTTTGACGAGGAGCACTCAAAGGAGGGTTACTCAAAGGTTGCCTTCTTTAGCTACTTCTATCTGGCTTTGAACCTTGGTTCACTCTTCTCAAACACAATTCTAGGCTATTTTGAAGATGAAGGACTGTGGGCTCTAGGGTTCTGGGTGTCTGCAGGCTCTGCTTTTGCTGCCCTTGTCTTATTTCTTCTTGGGACCCCAAGATATAGACACTTCAAACCTAGTGGCAATCCTCTTTCAAGGTTCAGCCAAGTCCTTGTTGCTGCATCAAGGAAATGGAGAGCTCAAATGGCATCAAATGGAGAGGATCTATATGTCATGGATGAAAATGAATCTCCCACCAATGGCAACAGGAAGATTCTCCACACCGAAGGGTTCAAGTTTCTGGATAGAGCAGCGATTATATCTTCCAGAGATCTAGAAGACCAAAAGAGTGGCGTTTATAACCCCTGGCGTCTCTGCCCTATAACTCAAGTTGAAGAAGTGAAGTGCATACTAAGACTTCTTCCTATTTGGCTTTGCACGATAATATACTCAGTGGTTTTCACACAAATGGCTTCTCTTTTTGTGGAGCAAGGGGCTGCCATGAAAACTACAATTTCCCATTTCAGAATACCACCTGCAAGCATGTCTAGCTTTGACATCCTCAGCGTAGCTGTCTTCATTTTCTTCTACCGTCGAGTGATTGATCCACTTGTCGGAAGACTTAAAAAGAAAAGTTCCAAGGGACTTACTGAGCTTCAGAGAATGGGAATAGGGCTTGTTATAGCTGTAATGGCAATGGTTTCAGCTGGAATAGTTGAATGCTACAGACTTAAGTATGCAGACCCAGTATGCCCCCACTGCAGTGGCACAAGCTCTTTAACCATCTTTTGGCAAATTCCTCAGTACACACTTATTGGAGCTTCAGAGGTTTTCATGTATGTAGGCCAGTTAGAGTTCTTCAATGCTCAGACGCCAGATGGCTTAAAGAGCTTCGGAAGTGCCCTTTGCATGACGTCCATATCTCTTGGGAACTACGTAAGTAGCTTACTTGTTAGTATAGTTATGAAGATCTCCACTGAGGATCACATGCCAGGGTGGATCCCTGGAAACTTAAACAGAGGTCACCTAGATAGGTTTTACTTCCTCTTAGCTATCTTGACATCTATAGATTTGGTCCTTTATATTGCATGTGCAAAGTGGTTCAAGAGTATACAGCTGGAAGGGAAATATGAAGAGAATGATATGCCTGGTAGCTTTAAAGTCTAA 1794 0.4353 MACLEVSKEVKFKGDTEELTLDGSVDWHGRPAIRAKSGRWVAGTIVLLNQGLATLAFFGVGVNLVLFLTRVMGQDNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRYKTCAIFQVIFVIGLVSLSLSSYLSLIRPKGCGNETIPCGKHSSLEMGMFYLSIYLIALGNGGYQPNIATFGADQFDEEHSKEGYSKVAFFSYFYLALNLGSLFSNTILGYFEDEGLWALGFWVSAGSAFAALVLFLLGTPRYRHFKPSGNPLSRFSQVLVAASRKWRAQMASNGEDLYVMDENESPTNGNRKILHTEGFKFLDRAAIISSRDLEDQKSGVYNPWRLCPITQVEEVKCILRLLPIWLCTIIYSVVFTQMASLFVEQGAAMKTTISHFRIPPASMSSFDILSVAVFIFFYRRVIDPLVGRLKKKSSKGLTELQRMGIGLVIAVMAMVSAGIVECYRLKYADPVCPHCSGTSSLTIFWQIPQYTLIGASEVFMYVGQLEFFNAQTPDGLKSFGSALCMTSISLGNYVSSLLVSIVMKISTEDHMPGWIPGNLNRGHLDRFYFLLAILTSIDLVLYIACAKWFKSIQLEGKYEENDMPGSFKV 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01401 597 Gene3D MFS general substrate transporter like domains 12 584 IPR036259 -
Gma17g01401 597 CDD MFS_NPF7 40 576 - -
Gma17g01401 597 SUPERFAMILY MFS general substrate transporter 31 583 IPR036259 -
Gma17g01401 597 Pfam POT family 108 536 IPR000109 GO:0016020|GO:0022857|GO:0055085
Gma17g01401 597 PANTHER PEPTIDE TRANSPORTER 15 586 - -
Gma17g01401 597 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 15 586 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01401 Gma-Chr17 13064129 13070091 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01401 1 591 Organic Solute Cotransporters AT1G32450 76.471 0.0 946
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01401 K14638 - gmx:100778608 1183.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01401 17 13064129 13070091 Gma17g01401 17 13064129 13070091 ECH
Gma17g01401 17 13064129 13070091 Gma05g00668 05 7493090 7499192 GST
Gma01g02029 01 55711981 55718617 Gma17g01401 17 13064129 13070091 PCT
Gma11g00383 11 3102988 3109793 Gma17g01401 17 13064129 13070091 PCT
Gma17g01401 17 13064129 13070091 Gma01g02029 01 55711981 55718617 PCT
Gma17g01401 17 13064129 13070091 Gma11g00383 11 3102988 3109793 PCT