Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g02029 ATGTCTTACTTAGAGTCTCAGGTCTACAAAGAGAGAAAGTTTGAAGAAGAATCAGAAGAGGTCACTCTTGATGGGAGTGTTGATTTCCATGGACGTCCTGCAATCAGAGCCAAATCTGGCAGATGGGTGGCTGCAATTATCATCCTCTTGAACCAAGCTCTGGCAACTCTTGCATTTTTTGGGATTGGAGTGAACCTAGTGTTGTTTCTGACAAGGGTGGTAGGACAAAACAATGCTGATGCAGCCAACAATGTGAGCAAGTGGACCGGAACTGTTTACATCTTCTCTCTAGTGGGTGCTTTCCTCAGTGATTCTTATTGGGGAAGATATAAAACTTGTGCTGTCTTTCAGGTCATATTTGTTATAGGTCTAATGTCCTTATCCCTTTCATCATACCTATTCTTGCTTAAGCCTAAAGGTTGTGGTAATGAATCAGTTAATTGTGGGAAACATTCAAAATTGGAGATGGGGATGTTCTACCTCTCAATCTATCTTGTTGCCTTGGGGAATGGAGGTTATCAACCAAATATTGCCACATTTGGGGCAGATCAGTTTGACGAGGAGCACTCAAAGGAGGGTCACAATAAGGTGGCCTTCTTTAGCTACTTCTACCTAGCTTTTAACATTGGCCAACTCTTCTCGAACACCATTCTGGTCTATTTTGAGGACGAAGGAATGTGGGCTCTTGGTTTCTGGCTGTCTGCAGGCTCCGCCTTTGCTGCATTGGTCTTGTTTCTTGTATGCACCCCAAGGTATAGACACTTCAAGCCTAGTGGCAACCCTCTCTCCAGGTTCAGCCAAGTCCTTGTGGCTGCATCAAGGAAATCCAAAGTTCAAATGTCATCAAACGGAGAGGACTTATTCAACATGGATGCAAAGGAGGCTTCCAACAATGCCAATAGAAAGATTCTCCACACTCACGGGTTCAAGTTCTTGGATAGGGCAGCGTTTATATCTTCAAGAGATCTAGGGGACCAGAAAGGGCTCGGTTACAACCCCTGGCGTCTCTGTCCTGTAAGTCAAGTTGAAGAAGTGAAGTGCATACTGAGACTACTTCCAATCTGGCTCTGCACCATAATATACTCGGTGGTTTTCACACAAATGGCTTCACTTTTTGTGGAGCAAGGTGCTGCCATGAAAACCAAGGTTTCCAACTTCAGAATACCACCAGCTAGCATGTCCAGCTTTGACATCCTCAGTGTGGCTGTTTTCATTTTCTTTTACCGTCGAGTTCTTGATCCGTTTGTGGGAAAACTTAAAAAGACAGATTCTAAGGGACTTACAGAACTTCAGAGAATGGGAGTTGGACTTGTTATAGCTGTACTGGCAATGGTTTCGGCTGGATTAGTTGAATGCTATAGGCTCAAGTATGCAAAACAAGGATGCATCCACTGCAATGACTCGAGCACTTTAAGCATCTTCTGGCAAATCCCTCAGTATGCATTTATAGGAGCTTCCGAGGTTTTTATGTACGTAGGCCAGTTGGAGTTCTTCAATGCTCAGACACCAGACGGCTTGAAGAGCTTTGGAAGTGCTCTTTGCATGACATCCATTTCCCTTGGGAACTATGTGAGTAGCTTACTTGTTAGTGTGGTTATGAAGATATCCACCGAAGATCACATGCCGGGGTGGATCCCTGGAAACCTCAACAAAGGTCACTTAGATAGATTTTACTTCCTCTTAGCTGCCTTGACATCGATAGACTTGATTGCTTATATTGCATGTGCAAAATGGTACAAGTCTATACAGCTAGAGGCAAACACTGGAGAGATTGATGAGCCAGAAGTATAA 1791 0.4394 MSYLESQVYKERKFEEESEEVTLDGSVDFHGRPAIRAKSGRWVAAIIILLNQALATLAFFGIGVNLVLFLTRVVGQNNADAANNVSKWTGTVYIFSLVGAFLSDSYWGRYKTCAVFQVIFVIGLMSLSLSSYLFLLKPKGCGNESVNCGKHSKLEMGMFYLSIYLVALGNGGYQPNIATFGADQFDEEHSKEGHNKVAFFSYFYLAFNIGQLFSNTILVYFEDEGMWALGFWLSAGSAFAALVLFLVCTPRYRHFKPSGNPLSRFSQVLVAASRKSKVQMSSNGEDLFNMDAKEASNNANRKILHTHGFKFLDRAAFISSRDLGDQKGLGYNPWRLCPVSQVEEVKCILRLLPIWLCTIIYSVVFTQMASLFVEQGAAMKTKVSNFRIPPASMSSFDILSVAVFIFFYRRVLDPFVGKLKKTDSKGLTELQRMGVGLVIAVLAMVSAGLVECYRLKYAKQGCIHCNDSSTLSIFWQIPQYAFIGASEVFMYVGQLEFFNAQTPDGLKSFGSALCMTSISLGNYVSSLLVSVVMKISTEDHMPGWIPGNLNKGHLDRFYFLLAALTSIDLIAYIACAKWYKSIQLEANTGEIDEPEV 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g02029 596 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 17 588 IPR000109 GO:0016020|GO:0022857|GO:0055085
Gma01g02029 596 PANTHER PEPTIDE TRANSPORTER 17 588 - -
Gma01g02029 596 CDD MFS_NPF7 42 578 - -
Gma01g02029 596 SUPERFAMILY MFS general substrate transporter 32 585 IPR036259 -
Gma01g02029 596 Pfam POT family 110 538 IPR000109 GO:0016020|GO:0022857|GO:0055085
Gma01g02029 596 Gene3D MFS general substrate transporter like domains 13 587 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g02029 Gma-Chr1 55711981 55718617 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g02029 1 587 Organic Solute Cotransporters AT1G32450 75.465 0.0 926
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g02029 K14638 - gmx:100776457 1168.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02029 01 55711981 55718617 Gma01g02029 01 55711981 55718617 ECH
Gma01g02029 01 55711981 55718617 Gma11g00383 11 3102988 3109793 GST
Gma01g02029 01 55711981 55718617 Gma17g01401 17 13064129 13070091 PCT
Gma01g02029 01 55711981 55718617 Gma05g00668 05 7493090 7499192 PCT
Gma17g01401 17 13064129 13070091 Gma01g02029 01 55711981 55718617 PCT
Gma05g00668 05 7493090 7499192 Gma01g02029 01 55711981 55718617 PCT