Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01394 ATGGCAGAGTTACCAGGATATTTTCGTTACTGCTTGAACACAGGGAAACTTGTCCTTTTGGGAATTTTGGTCTCTGGAGGAGTTGTTTTGCAAATTTTGGCATGTGCATTGTATAATAATTGGTGGCCAATGCTAACTGCAATAACATATGTGCTTCTTCCAATGCCTTTGCTCTTCTTGGTGGGATCTGGACGTTCTTCCTTATTTTCTGAATCAGATAGCAGCTGGGTGAATGCAACCAAGTTCTTAACCGGGGCCTCTGCTGTTGGAAGCATTGCCATTCCAGCCATATTAAAGCATTCTGGTGTTATAGGTTGGGGAGCCTTTGCAATGGAACTCTCTTCCTTCTTTGTGTTTGTATTTGCAATATTGTGTTACATTCGGATTAATGATGAAGATGATTATAGTAGTCTTTGA 417 0.4077 MAELPGYFRYCLNTGKLVLLGILVSGGVVLQILACALYNNWWPMLTAITYVLLPMPLLFLVGSGRSSLFSESDSSWVNATKFLTGASAVGSIAIPAILKHSGVIGWGAFAMELSSFFVFVFAILCYIRINDEDDYSSL 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01394 138 PANTHER LEPTIN RECEPTOR-RELATED 1 135 IPR007262 -
Gma17g01394 138 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 55 HOMOLOG 1 135 - -
Gma17g01394 138 Pfam Vacuolar protein sorting 55 17 133 IPR007262 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01394 Gma-Chr17 12918999 12920083 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01394 1 134 EF-hand Containing Proteins AT1G32410 69.403 1.29e-65 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01394 - - gmx:100775400 271.166
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02040 01 55805011 55805811 Gma17g01394 17 12918999 12920083 PCT
Gma11g00373 11 3036028 3038534 Gma17g01394 17 12918999 12920083 PCT
Gma17g01394 17 12918999 12920083 Gma01g02040 01 55805011 55805811 PCT
Gma17g01394 17 12918999 12920083 Gma11g00373 11 3036028 3038534 PCT