Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g02040 ATGGCAGACTTACCAGGGTATCTTCGTGCCTGTTTGAACACAGGGAAGCTTGCCTCCTTGGCAATTTTGGTGTCTGGAGGAATTGTCTTGCAAATTTTGGCATGTGCCTTGTATAATAACTGGTGGCCGATGCTGAGTGTGTTAACGTATGTGCTTCTGCCAATGCCTTTGCTGTTCTTTGCGGGGTCTGATGATTCTATATTTTCTGAATCTGATAATAGCTGGGTGAATTTTACTAAGTTCTTGACTGGAGCCTCAACTGTGGGAGGTATTGCCATTCCAAGCATATTAAAGCATGCTGGGGTTATCGGTTGGGGAGCCTTTGCAATGGAACTCTCTTCCTACTTTGTGTTTGGAATGGCCATAATATGTTACCTTTGGATGAGTGGTGATGATGATTACAGTATCCTATGA 414 0.4372 MADLPGYLRACLNTGKLASLAILVSGGIVLQILACALYNNWWPMLSVLTYVLLPMPLLFFAGSDDSIFSESDNSWVNFTKFLTGASTVGGIAIPSILKHAGVIGWGAFAMELSSYFVFGMAIICYLWMSGDDDYSIL 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g02040 137 PANTHER LEPTIN RECEPTOR-RELATED 1 134 IPR007262 -
Gma01g02040 137 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 55 HOMOLOG 1 134 - -
Gma01g02040 137 Pfam Vacuolar protein sorting 55 18 132 IPR007262 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g02040 Gma-Chr1 55805011 55805811 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g02040 1 135 EF-hand Containing Proteins AT1G32410 71.739 5.06e-65 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g02040 - - gmx:100500037 281.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02040 01 55805011 55805811 Gma11g00373 11 3036028 3038534 GST
Gma01g02040 01 55805011 55805811 Gma17g01394 17 12918999 12920083 PCT
Gma17g01394 17 12918999 12920083 Gma01g02040 01 55805011 55805811 PCT