Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01376 ATGTGTAGTGTTAAATCACGAGGCGACAACATCGACATGGAGGGTCTCATCAACGGCTTCATCAACGTTGCTCTCGGAGCTGATGGTGGCGATCGGGAAGAACAACAACACGGGAGAGACGACCGTAGTAGAAGCTCCTGGGCTGAAGTCGTCTCCCAGGATCAACAAGATCACCCTCTTCCTCATCACCAACACAAGGAACAATATCGTCCTCAGTACGAGGAGCCCCAATCTCAAAGTTCCTACAAACCCCAGAAGGTGGATGAAGGTGAAGATGGATGGCAGACTGTTGGTAGAAAGCCTTCAAGGCATCCACATAAGGTTCAAAAGGACAACTGGAACAGCTATAAACGACCTGCTGATGAGCAAGAATACTCTAATGAGGTTGAAGTTGGTGCTGATGTGGAGCCCTCAGAAGATGAACTTGCTGATCTGTCAAGAGCTTGTGAAAAACTCTGGGCTCTTGATTTAAATCGTTTGGTACCTGGCTTACACTATGAAATTGACTGTGGTGAAGGGAAAAAGGTATACCAAAAGGAAGATATGGCACAGGGGAGCTTGTTTACTTGGGTTAGCGATGATGTATTCAGAAAGCCTACATTTGCCCGTTTTCTTTCACTTTTAGATAATTACAATCCACATCAAGGATGTAAGGAAGTAGTCACATCTGAAGAGAGACAAGAGCAAGCTTCTTTCATAGAAGAAATCAGTAGAACAGCACCAATTAAGTATCTTCACAAGTATCTTGCATCCAAGCAAATTGTATCAGGGAATTACCAAGATTTCAAAAGAATGATTACCAGTCTGTGGTTTGACCTTTATGGCCGTGGTGGCACTTCTGGTTCCTCTTCTGCTTTTGAACATGTTTTTGTTGGAGAAACCAAACAATGTGGTGAAGTTTCTGGCTTTCATAACTGGCTGCAGTTTTACCTTGAAGAAGCAAAGGGGAGAGTTGATTATCAAGGATATATTTTTCCCCGTCGACGGGGAGAAACTCCTGACTCTGAAGCTCAGCTTCTGACTATTCAGTTTGAATGGAATGGTGTCCTAAAATCTGTATCCAGCACTTTGGTTGGAGTGAGCCCTGAATTTGAAATTGCTTTGTATACCCTGTGTTTCTATGTTGGTAGGGAGGATAACCACATTCAGCTTGGTCCATATGGGGTTAATATCAAGTGCTATCGATTGGGTGATCGAATTGGATCTGTTTTCCCCATTGCAGATTCTTGA 1230 0.4358 MCSVKSRGDNIDMEGLINGFINVALGADGGDREEQQHGRDDRSRSSWAEVVSQDQQDHPLPHHQHKEQYRPQYEEPQSQSSYKPQKVDEGEDGWQTVGRKPSRHPHKVQKDNWNSYKRPADEQEYSNEVEVGADVEPSEDELADLSRACEKLWALDLNRLVPGLHYEIDCGEGKKVYQKEDMAQGSLFTWVSDDVFRKPTFARFLSLLDNYNPHQGCKEVVTSEERQEQASFIEEISRTAPIKYLHKYLASKQIVSGNYQDFKRMITSLWFDLYGRGGTSGSSSAFEHVFVGETKQCGEVSGFHNWLQFYLEEAKGRVDYQGYIFPRRRGETPDSEAQLLTIQFEWNGVLKSVSSTLVGVSPEFEIALYTLCFYVGREDNHIQLGPYGVNIKCYRLGDRIGSVFPIADS 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01376 409 Pfam Endoribonuclease XendoU 144 405 IPR018998 GO:0004521
Gma17g01376 409 MobiDBLite consensus disorder prediction 56 72 - -
Gma17g01376 409 SUPERFAMILY EndoU-like 143 407 IPR037227 -
Gma17g01376 409 PANTHER PLACENTAL PROTEIN 11-RELATED 28 408 IPR039787 GO:0004521
Gma17g01376 409 ProSiteProfiles Eukaryotic uridylate-specific endoribonuclease (EndoU) domain profile. 141 409 IPR018998 GO:0004521
Gma17g01376 409 MobiDBLite consensus disorder prediction 85 99 - -
Gma17g01376 409 MobiDBLite consensus disorder prediction 30 47 - -
Gma17g01376 409 PANTHER - 28 408 - -
Gma17g01376 409 MobiDBLite consensus disorder prediction 27 112 - -
Gma17g01376 409 CDD XendoU 141 405 IPR018998 GO:0004521
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01376 Gma-Chr17 12666424 12670376 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01376 K14648 - gmx:100813919 820.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01376 17 12666424 12670376 Gma17g01376 17 12666424 12670376 ECH
Gma17g01376 17 12666424 12670376 Gma05g00640 05 6925104 6926323 GST