Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00640 ATGGCCACTGAATTCCCGTATTGTGCAAGCTTAGACAGTGTGTCATTGGTTCCCAAGGAAAACTGGCACAGCAATAAACGACCTGCTGATGAGCAAGAATACTCTAATGAGGTTGAAGTTCGTGCTAGTGTGGAGCCCTCAGAAGATGAACTTGCTGATCTGTCAAGAGCTTGTGACAAACTCTGGGATCTAGATTTAAATCTTTTGGTACCTTGCAAAGACTATGAAATTGACTGTGGTGAAGGGAAAAAGGAATACCAAAAGGAAGATATGGCACAGGGGAGCTTGTTTACTTGGGTTAGTGATGATGTATTCAAAAAGCCTACATTTGCTCGTTTTCTTTCACTTTTGGATAACTACAATCCACATCAAGGATGTAAGGAAGTAGTCACATCTGAAGAGAGACAAGAGCAAGCTTCTTTCATTGAAGAAATCAGTAGAACAGCACCAATTAAATATCTTCACAAGTATCTTGCATCCAAGGGAATTGTATCAGAGACTTGCCAAGAATTCAAAAGAATGATTACCAGTCTGTGGTTTGACCTTTATGGCCGTGGTGGCACTTCTGGTTCCTCTTCTGCTTTTGAACATGTTTTTGTTGGAGAAACCAAACAATGTGGTGAAGTTTCTGGCTTTCATAACATGCTGCAGCTATGA 657 0.4079 MATEFPYCASLDSVSLVPKENWHSNKRPADEQEYSNEVEVRASVEPSEDELADLSRACDKLWDLDLNLLVPCKDYEIDCGEGKKEYQKEDMAQGSLFTWVSDDVFKKPTFARFLSLLDNYNPHQGCKEVVTSEERQEQASFIEEISRTAPIKYLHKYLASKGIVSETCQEFKRMITSLWFDLYGRGGTSGSSSAFEHVFVGETKQCGEVSGFHNMLQL 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00640 218 CDD XendoU 50 218 IPR018998 GO:0004521
Gma05g00640 218 Pfam Endoribonuclease XendoU 53 217 IPR018998 GO:0004521
Gma05g00640 218 PANTHER - 19 217 - -
Gma05g00640 218 SUPERFAMILY EndoU-like 52 217 IPR037227 -
Gma05g00640 218 ProSiteProfiles Eukaryotic uridylate-specific endoribonuclease (EndoU) domain profile. 50 218 IPR018998 GO:0004521
Gma05g00640 218 PANTHER PLACENTAL PROTEIN 11-RELATED 19 217 IPR039787 GO:0004521
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00640 Gma-Chr5 6925104 6926323 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00640 K14648 - gmx:100797110 451.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00640 05 6925104 6926323 Gma05g00640 05 6925104 6926323 ECH
Gma17g01376 17 12666424 12670376 Gma05g00640 05 6925104 6926323 GST