Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01287 ATGTCAATCACCTTGCGAACTCCGCCTTCTACAACTCTCTCTTCTGCTGCATCTTCCATTCACAGAACAAGATCCACCACCTTCTCCTTCTCGCTTTGTTCCCCACCAACTCTTCGCTTCAATTCCCACAGCTCCCTCTCTCTTACTCGCGCTTCCGCTTCCTCTATCACTACCGCTTCGACCACTGAGCTGGACGCTGTGTCCTCCTTCAGCGAGATCGTTCCCGACACCGTCGTTTTCGATGATTTCGAAAAGTTTCCTCCAACTGCTGCTACTGTCAGTTCCTCGCTCCTCTTGGGAATATGTGGCCTTCCAGACACCATTTTTAGGAATGCCGTGGAAATGGCTTTAGCTGATTCTGAGTGTTATGGACTTGAAAATCCTAACGCGCGATTGTCTTGTTTTGTCAACAAGGCTTTTGCAAATGTCGGTAGTGACATGGCAAAGCTTGTCCCTGGCCGTGTTTCGACGGAAGTGGATGCGCGGTTTGCTTATGACACACCTGCCATTATCAGGAAGGTACATGACCTGTTGAAGTTGTACAATGATAGCAATGTACCTCCGAAACGTCTGTTGTTTAAAATTCCTTCAACTTGGCAAggaatagaggctgcaaggttgctggaatctgaaggcatacagacacatttgacctttgtctacagTTTTGCTCAAGCTGCTGCTGCAGCTCAAGCTGGTGCTTCTGTCATTCAAATTTTTGTTGGTCGCATAAGGGATTGGGCACGTAATCATTCTGGTGACACAGAGATAGAATCTGCCCAGCTAAGAGGAGAGGATCCAGGGCTGGCATTGGTGACAAAAGCTTACAATTATATTCACAAATATGGACATAAGTCAAAGTTGATGGCAGCAGCAGTTCGCAACAAACAGGATCTATTTAGTCTTCTGGGGGTTGACTATATCATAGCTCCTTTAAAGGTATTGCAGTCTCTCAAAGAATCTATTGCTTCTCCTGATGAGAAGTACTCTTTTGTTAGGAGGTTATCTGCTCAGTCTGCTGCCAAGTACACATTTAGTGATGAAGAGCTTGTTAAATGGGACGAAGATAGCCTCACAAAAGCCATGGGGCCTGCAGCTGTGCAGCTTCTGGCTGCTGGACTGGATGGCCATGCTGATCAAGCAAAGCGGGTGGAAGAGTTATTTGAGAAAATTTGGCCACCACCTAATGTATGA 1194 0.4397 MSITLRTPPSTTLSSAASSIHRTRSTTFSFSLCSPPTLRFNSHSSLSLTRASASSITTASTTELDAVSSFSEIVPDTVVFDDFEKFPPTAATVSSSLLLGICGLPDTIFRNAVEMALADSECYGLENPNARLSCFVNKAFANVGSDMAKLVPGRVSTEVDARFAYDTPAIIRKVHDLLKLYNDSNVPPKRLLFKIPSTWQGIEAARLLESEGIQTHLTFVYSFAQAAAAAQAGASVIQIFVGRIRDWARNHSGDTEIESAQLRGEDPGLALVTKAYNYIHKYGHKSKLMAAAVRNKQDLFSLLGVDYIIAPLKVLQSLKESIASPDEKYSFVRRLSAQSAAKYTFSDEELVKWDEDSLTKAMGPAAVQLLAAGLDGHADQAKRVEELFEKIWPPPNV 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01287 397 PANTHER ALDOLASE SUPERFAMILY PROTEIN 1 397 - -
Gma17g01287 397 CDD Transaldolase_TalAB 62 388 IPR004730 GO:0004801|GO:0005737|GO:0006098
Gma17g01287 397 SUPERFAMILY Aldolase 62 392 - -
Gma17g01287 397 Pfam Transaldolase/Fructose-6-phosphate aldolase 108 363 IPR001585 GO:0005975
Gma17g01287 397 PANTHER TRANSALDOLASE 1 397 IPR001585 GO:0005975
Gma17g01287 397 Gene3D Aldolase class I 61 391 IPR013785 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01287 Gma-Chr17 11447464 11451786 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01287 K00616 - gmx:100800377 735.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01287 17 11447464 11451786 Gma17g01287 17 11447464 11451786 ECH
Gma17g01287 17 11447464 11451786 Gma05g00538 05 5180771 5185851 GST