Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00538 ATGTCACTCACCTTGCAAACTCCGCCTTCTACAACTCTCTCTTCTGCATCTCCCATTCACAGAACAATAACAAGATACACCACATTCTCCTTCTCGCTTCGTCCTCCAACAACTCTTCACTTCAATCCCCACAGGTCCCTCCCTCTAATTCGCGCTTCCAATTCTTCTATCAATGCCGCTTCGACCACTGAACTGGACGCTGTGTCCGCCTTCAGCGAGATCGTTCCCGACACCGTCGTTTTCGATGATTTCGAAAAGTTTCCTCCAACTGCTGCTACTGTTAGTTCATCGCTTCTCTTGGGAATATGTGGCCTTCCAGACACCATTTTTAGGAATGCTGTGGAAATGGCTTTAGCTGATTCTGAGTGTTATGGACTTGAAAATCCTAACGCGCGATTGTCTTGTTTTGTCAACAAGGCTTTCGCGAATATCGGTAGTGACATGGCAAAGCTTGTCCCTGGCCGTGTTTCGACAGAAGTGGATGCGCGGCTTGCTTATGACACACATGCCATTATCAGGAAGGTGCATGACCTGTTGAAGTTGTACAATGATAGCAATGTACCTCCGCAACGTCTGTTGTTTAAAATTCCTTCCACTTGGCAAGGAATAGAGGCTGCAAGGTTGCTGGAATCCGAAGGCATACAGACACATTTGACCTTTGTCTACAGTTTTGCTCAAGCTGCAGCTGCAGCTCAAGCTGGTGCTTCTGTCATTCAAATTTTTGTTGGTCGCATAAGGGATTGGGCACGTAATCATTCTGGTGACACAGAGATAGAATCTGCTCAGCTAAGAGGAGAGGATCCAGGGTTGGCATTGGTGACAAAAGCTTACAATTATATTCACAAATATGGACATAAGTCAAAGTTGATGGCAGCAGCAGTTCGCAACAAACAGGACCTATTTAGTCTTCTGGGGGTTGACTATATCATAGCTCCTTTAAAGGTATTGCAGTCTCTCAAAGAATCTGTTGCTTCTCCTGATGAGAAGTACTCTTTTGTTAGGAGGTTATCCCCTCAGTCTGCTGCCAAGTACACATTTAGTGATGAAGAGCTTGTTAGATGGGACGAAGATAGCCTCTCAAAGGCCATGGGGCCTGCAGCTGTGCAGCTTCTGGCTGCTGGACTGGATGGCCATGCTGATCAAGCAAAGCGGGTGGAAGAGTTATTTGGGAAAATTTGGCCACCACCAAATGTATGA 1197 0.4628 MSLTLQTPPSTTLSSASPIHRTITRYTTFSFSLRPPTTLHFNPHRSLPLIRASNSSINAASTTELDAVSAFSEIVPDTVVFDDFEKFPPTAATVSSSLLLGICGLPDTIFRNAVEMALADSECYGLENPNARLSCFVNKAFANIGSDMAKLVPGRVSTEVDARLAYDTHAIIRKVHDLLKLYNDSNVPPQRLLFKIPSTWQGIEAARLLESEGIQTHLTFVYSFAQAAAAAQAGASVIQIFVGRIRDWARNHSGDTEIESAQLRGEDPGLALVTKAYNYIHKYGHKSKLMAAAVRNKQDLFSLLGVDYIIAPLKVLQSLKESVASPDEKYSFVRRLSPQSAAKYTFSDEELVRWDEDSLSKAMGPAAVQLLAAGLDGHADQAKRVEELFGKIWPPPNV 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00538 398 CDD Transaldolase_TalAB 63 389 IPR004730 GO:0004801|GO:0005737|GO:0006098
Gma05g00538 398 Pfam Transaldolase/Fructose-6-phosphate aldolase 109 381 IPR001585 GO:0005975
Gma05g00538 398 SUPERFAMILY Aldolase 63 393 - -
Gma05g00538 398 Gene3D Aldolase class I 62 392 IPR013785 -
Gma05g00538 398 PANTHER TRANSALDOLASE 1 398 IPR001585 GO:0005975
Gma05g00538 398 PANTHER ALDOLASE SUPERFAMILY PROTEIN 1 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00538 Gma-Chr5 5180771 5185851 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00538 K00616 - gmx:100789900 756.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00538 05 5180771 5185851 Gma05g00538 05 5180771 5185851 ECH
Gma17g01287 17 11447464 11451786 Gma05g00538 05 5180771 5185851 GST