Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01271 ATGTTGGATGATGAGGCACATCAGAAAGAGAAACTAAAAGGAGAAATAGCAAGATTGCAAAGTCAATTGTTGCAATTAGGTTTTGAAGTTGGCAAAACAAAACAACAAATCGATGGATTTGGATTTGAAAAAGATGCTGGTGGTTTATATTCTCCCACCTCCCTAGTTAAGCATCAACAGCAAGCTTCAGGAAATGGAGAGAAGGCCTCAGTTGCCAAGCTCTTTGAACAAGGCAGGGGATTGCAGAAGATTCTGTCATTGCTTGAAGCAGAAGTTACTGATGCACGAATCCATGCCGTGAAAATAGTAGCAAATTTATCTTCTGAAGGTTTCAGTTTTGGCACCTTACCAGGTGGACTTACGTCCTTGCTTATACTGCTTAAGAACTCACAGGATGAAACCACACAGACAGTTGCAGCAAGTGCCATAGCAAATTTGGCAATGAATGGTAAACTTCCATATCTCATTGTGGCTCAAGGAGGCATTCATTTACTGTCAATGACAGCAGCCAATGCCGAAGATCCTCAGACCCTTCGAATGGTTGCTGGAGCAATTGCTAATCTTTGTGGTAATGATAAACTGCAAATAAAGCTAACGGAAGAAGGTGGTATCAAGGCACTGTTGGGAATGTTCAGATGCATGCATCCTGATGTAAATACCCAGATTGCCCGTGGAATAGCCAACTTTGCCAAGTGCGAGTCTAAAGCATCTACACAAGGGACAAAGGTTGGAAGGTCTTTACTTATTGAGGACGGTGTGCTTCCATGGATAGTGCAAAACGCAAATAATGAAGTCTCGTTGGTTAGGCGTCATATTGAGCTTGCACTCTGTCATTTAGCACAACATGAAGCAAATGCAAGAGAGATGATTAGTGGAGGTGCAATACAAGAGTTGGTTCGTATATCGAGAGATTGCTCAAGAGAAGACATAAGGATTCTTGGACGTATAGAACTCTAA 957 0.4201 MLDDEAHQKEKLKGEIARLQSQLLQLGFEVGKTKQQIDGFGFEKDAGGLYSPTSLVKHQQQASGNGEKASVAKLFEQGRGLQKILSLLEAEVTDARIHAVKIVANLSSEGFSFGTLPGGLTSLLILLKNSQDETTQTVAASAIANLAMNGKLPYLIVAQGGIHLLSMTAANAEDPQTLRMVAGAIANLCGNDKLQIKLTEEGGIKALLGMFRCMHPDVNTQIARGIANFAKCESKASTQGTKVGRSLLIEDGVLPWIVQNANNEVSLVRRHIELALCHLAQHEANAREMISGGAIQELVRISRDCSREDIRILGRIEL 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01271 318 Coils Coil 2 29 - -
Gma17g01271 318 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 118 161 IPR000225 GO:0005515
Gma17g01271 318 Pfam Armadillo/beta-catenin-like repeat 118 147 IPR000225 GO:0005515
Gma17g01271 318 Gene3D - 4 313 IPR011989 -
Gma17g01271 318 PANTHER CENTROMERE PROTEIN E 1 314 - -
Gma17g01271 318 SUPERFAMILY ARM repeat 74 311 IPR016024 -
Gma17g01271 318 PANTHER KINESIN-LIKE PROTEIN 1 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01271 Gma-Chr17 11246067 11249469 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01271 - - ccaj:109807166 478.018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01271 17 11246067 11249469 Gma17g01271 17 11246067 11249469 ECH
Gma17g01271 17 11246067 11249469 Gma05g00516 05 4944974 4949459 GST