Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00516 ATGAAGGAGGAAAGCATGGTAAAAGTAAAGGAGGAAATTGATTACAAAAGTTTATGTAGAAGGCTAGACAGAGAATTGGACAAACTCACTATGGAATATGAAAGGCAGCAGAAGGTATTTGAGGATGATATTGAAAGATTGACCACAGAAGCACAACATTGCATATTAGAGGCCCAACAGAATTATTCGGATTCGTTGGAGAAGGAAAGATTGAAATACCAGAAAGACTATAAAGAATCAATTAAGAGGCTTGAAGAGAAGGTAATGGAGAATAAAAAAAAGTACGAGGAATTTTGTATGACATCTACTGAAGAGGTAGCCTTTGTTCCTGCTGAGGAAGTAGTCATTTTGAAAAAAATACTTCAGAGAGAGACCCTTTTGAGAAATGCTGCCGAAGGGGAGATAAATCATCTTAAAAATCAAATGGCAGAACTGAAAATGTTGGAGGCATCAAGAGAATCAGATATCTTAAAACTTCGTAAGATGTTGGAAGATGAGGCACATCAGAAAGAGAAATTCAAAGGAGAAATAGCAAGATTGCAAAGTCAATTGTTGCAATTAGGTTTTGAAGTTGGCAAAACAAAGCAACAACAGCAAGCTTCAGGAAATGGAGAGAAGGCCTCAGTTGCCAAGCTCTTTGAACAAGGCAGGGGATTGCAGAAGATTTTGTCATTGCTTGAAGCAGAAGCTACTGATGCACGAATTAATGCTGTGAAAATAGTAGCAAATTTATCTTCTGAAGAAACAAATCAGAAGAAGATTGTAGAAGCAGGCGGACTTACGTCCTTGCTTACACTGCTTAAGAACTCACAAGATGAAACCACACAGAGAGTTGCAGCAAGCGCCATAGCAAATTTGGCAATGAATGAAACAAATCAAGATCTCATTGTGGCTCAGGGAGGCATTAATATACTGTCAATGACAGCAGCCAATGCCGAAGATCCTCAGACCCTTCGAATGGTTGCTGGAGCAATTGCTAATCTTTGTGGCAATGATAAACTGCAAATAAAGCTAAGGGGAGAAGATGGTATCAAGGCACTGTTGGGAATGGTCAGATGCAGACATCCTGATGTACATATTCAGATTGCCCGCGGAATTGCCAACTTTGCGAAGTGCGAATCAAAAGCATCTACACAAGGGACACAGGTTGGAAGGTCATTACTTATTGAGGATGGTGTGCTTCCATGGATAGTGCAAAACGCAAATAATGAAGTCTCGTTGGTTAGGCGTCATATTGAGCTTGCACTGTGTCATTTAGCACAACATGAAGCAAATGCAAGAGACATGATTAGTGGAGGTGCAATATTAGAGTTGGTTCGTATATCGAGAGATTGTTCACGAGAAGACATAAGGATTCTTGCACGTAGAACACTAATCTCCAGCCCCGCATTCCAAGCTGAAATTAAGCGTTTGAAGATAGATTATTGA 1428 0.3992 MKEESMVKVKEEIDYKSLCRRLDRELDKLTMEYERQQKVFEDDIERLTTEAQHCILEAQQNYSDSLEKERLKYQKDYKESIKRLEEKVMENKKKYEEFCMTSTEEVAFVPAEEVVILKKILQRETLLRNAAEGEINHLKNQMAELKMLEASRESDILKLRKMLEDEAHQKEKFKGEIARLQSQLLQLGFEVGKTKQQQQASGNGEKASVAKLFEQGRGLQKILSLLEAEATDARINAVKIVANLSSEETNQKKIVEAGGLTSLLTLLKNSQDETTQRVAASAIANLAMNETNQDLIVAQGGINILSMTAANAEDPQTLRMVAGAIANLCGNDKLQIKLRGEDGIKALLGMVRCRHPDVHIQIARGIANFAKCESKASTQGTQVGRSLLIEDGVLPWIVQNANNEVSLVRRHIELALCHLAQHEANARDMISGGAILELVRISRDCSREDIRILARRTLISSPAFQAEIKRLKIDY 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00516 475 Coils Coil 121 148 - -
Gma05g00516 475 Coils Coil 19 50 - -
Gma05g00516 475 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 217 259 IPR000225 GO:0005515
Gma05g00516 475 PANTHER KINESIN-LIKE PROTEIN KIN-UA 195 467 IPR033291 GO:0008017|GO:0032886|GO:0048364
Gma05g00516 475 PANTHER KINESIN-LIKE PROTEIN KIN-UA 1 197 IPR033291 GO:0008017|GO:0032886|GO:0048364
Gma05g00516 475 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 258 301 IPR000225 GO:0005515
Gma05g00516 475 Coils Coil 163 183 - -
Gma05g00516 475 Pfam Armadillo/beta-catenin-like repeat 250 287 IPR000225 GO:0005515
Gma05g00516 475 SUPERFAMILY ARM repeat 212 458 IPR016024 -
Gma05g00516 475 Gene3D - 309 468 IPR011989 -
Gma05g00516 475 PANTHER KINESIN-RELATED 195 467 IPR027640 GO:0003777|GO:0007018
Gma05g00516 475 PANTHER KINESIN-RELATED 1 197 IPR027640 GO:0003777|GO:0007018
Gma05g00516 475 Coils Coil 74 94 - -
Gma05g00516 475 SMART arm_5 331 371 IPR000225 GO:0005515
Gma05g00516 475 SMART arm_5 289 330 IPR000225 GO:0005515
Gma05g00516 475 SMART arm_5 246 288 IPR000225 GO:0005515
Gma05g00516 475 Gene3D - 196 308 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00516 Gma-Chr5 4944974 4949459 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00516 - - gmx:100806324 895.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00516 05 4944974 4949459 Gma05g00516 05 4944974 4949459 ECH
Gma17g01271 17 11246067 11249469 Gma05g00516 05 4944974 4949459 GST