Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01262 ATGGCTGATCTCTTTGCGTGGCTCATCTCCTTCTTCATTCTTATTGCCTTAATTGTACTCGTCATTTACCAGTTAATGTGCCTGGCAGACCTAGAATTTGATTATATAAATCCATATGATTCCTCATCTCGAATAAACAAAGTGATATTGCCTGAATATATTATAGTAGGTGTCCTATTCGGCTTCTACCTTGTAACAGGGCATTGGATAATGTCATTGATCTGTGCTCCTTACCTCTACTACAATGTGAGATTGTACAGACAAGGAAAACATCTGGTTGATGTCACAGAGATATTCAACTTGCTCCCTAAGGAAAAGAAGCAAAGGCTTTTCAAACTCTTCTATATTGTTTTTATCCTTTTCCTATCCTTATTTTGGATGATCTACACATCTTTGGATGACCATGATGATTGA 414 0.3696 MADLFAWLISFFILIALIVLVIYQLMCLADLEFDYINPYDSSSRINKVILPEYIIVGVLFGFYLVTGHWIMSLICAPYLYYNVRLYRQGKHLVDVTEIFNLLPKEKKQRLFKLFYIVFILFLSLFWMIYTSLDDHDD 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01262 137 Pfam Cornichon protein 5 125 IPR003377 GO:0016192
Gma17g01262 137 PANTHER CORNICHON FAMILY PROTEIN 1 135 - -
Gma17g01262 137 SMART Cornichon_2 4 125 IPR003377 GO:0016192
Gma17g01262 137 PANTHER CORNICHON-RELATED 1 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01262 Gma-Chr17 11169860 11172765 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01262 K20368 - gmx:100306019 255.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01262 17 11169860 11172765 Gma05g00509 05 4865981 4869450 GST
Gma17g01262 17 11169860 11172765 Gma01g02138 01 56709112 56711630 PCT
Gma17g01262 17 11169860 11172765 Gma11g00268 11 2133913 2136315 PCT