Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g02138 ATGGCTGATCTATTTGCATGGCTTATCTCCTTCTTCCTCCTCATTGCCTTACTTGTCCTCGTTATGTACCAGCTAATGTGCCTGGCAGACCTAGAATTTGATTATATAAATCCTTATGACTCTTCAGCTCGAATAAATATGGTGGTTTTGCCAGAATATATTACGCAAGCTGTCCTGTGCTGCTTCTACCTTCTTACCGGGCATTGGATTATGGcactcttctgtcttccttatctttctctcaatctccgattGTATAGGCAAGGAAGGCATTTGGTTGATGTTACTGAGATATTCAACCTGCTCTCTTGGGAAAAGAAGCAACGGCTCGTCAAACTCTTCTATCTTGTTTTCACCCTTTTCCTCTCTGTATTTTGGATGATTTACACATCATTGGATTAG 402 0.3706 MADLFAWLISFFLLIALLVLVMYQLMCLADLEFDYINPYDSSARINMVVLPEYITQAVLCCFYLLTGHWIMALFCLPYLSLNLRLYRQGRHLVDVTEIFNLLSWEKKQRLVKLFYLVFTLFLSVFWMIYTSLD 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g02138 133 Pfam Cornichon protein 5 125 IPR003377 GO:0016192
Gma01g02138 133 PANTHER CORNICHON FAMILY PROTEIN 1 133 - -
Gma01g02138 133 PANTHER CORNICHON-RELATED 1 133 - -
Gma01g02138 133 SMART Cornichon_2 4 125 IPR003377 GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g02138 Gma-Chr1 56709112 56711630 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g02138 K20368 - gmx:100780362 273.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02138 01 56709112 56711630 Gma01g02138 01 56709112 56711630 ECH
Gma01g02138 01 56709112 56711630 Gma11g00268 11 2133913 2136315 GST
Gma17g01262 17 11169860 11172765 Gma01g02138 01 56709112 56711630 PCT
Gma05g00509 05 4865981 4869450 Gma01g02138 01 56709112 56711630 PCT