Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01209 ATGAACAACTGTGATTGGCGCCTTGGTTTCCGCAATCGGTTTTCGCTTCTTCTACCGTTCCTAACCGCACGCCAAATCCTCGCTAAACGGCACCGTTTCCTCTCCCCGCGACCCTGTCGACTCCTCCAAACGCAAAGGGTAAATTTCAGTTCTCGTGCTGAGAGGTCCAAAGACCAGGTTGGGGCTTGTTTGGTGAGTCAAGATGGTGTAATTCTTGGAATTGGTTATAATGGGTTTCCAAGAGGTTGTTCTGATGACAAGCTACCCTGGGCACAGAAATCCAGGACTGGGAATCCTTTGAAGACAAAGTACCCATGCAATCTTGTTGACGGTTTTTTTTTTTTGTTGGTCTACTTTTGTTATGTTTgTCATGCAGAAGTTAATGCTATTCTCAACACTAATCATGCCTCTGCTGCTGGACAACGGCTATATGTGACCATGTTTCCCTGCAATGAATGTGCTAAGATCATAATCCAGTCAGGAGTTTCTGAAGTAATTTATTTTGTGGAGAAGAGACTAAAAAAATTCAGATATTGCATATGTTGCCTCTCACAAGCTACTGTCATTGGCTGGTGTAAAGTTCAGGAAACATCAACCAATGATGAATGA 609 0.4335 MNNCDWRLGFRNRFSLLLPFLTARQILAKRHRFLSPRPCRLLQTQRVNFSSRAERSKDQVGACLVSQDGVILGIGYNGFPRGCSDDKLPWAQKSRTGNPLKTKYPCNLVDGFFFLLVYFCYVCHAEVNAILNTNHASAAGQRLYVTMFPCNECAKIIIQSGVSEVIYFVEKRLKKFRYCICCLSQATVIGWCKVQETSTNDE 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01209 202 PANTHER DEOXYCYTIDYLATE DEAMINASE-RELATED 52 175 IPR015517 -
Gma17g01209 202 Pfam Cytidine and deoxycytidylate deaminase zinc-binding region 48 168 IPR002125 -
Gma17g01209 202 SUPERFAMILY Cytidine deaminase-like 55 185 IPR016193 GO:0003824
Gma17g01209 202 ProSitePatterns Cytidine and deoxycytidylate deaminases zinc-binding region signature. 124 157 IPR016192 GO:0008270|GO:0016787
Gma17g01209 202 Gene3D Cytidine Deaminase, domain 2 44 198 - -
Gma17g01209 202 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 35 181 IPR002125 -
Gma17g01209 202 PANTHER CYTIDINE/DEOXYCYTIDYLATE DEAMINASE FAMILY PROTEIN 52 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01209 Gma-Chr17 10631682 10633868 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01209 K01493 - gmx:100792003 204.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01209 17 10631682 10633868 Gma17g01209 17 10631682 10633868 ECH
Gma17g01209 17 10631682 10633868 Gma05g00454 05 4320853 4323185 GST