Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00454 ATGAACTCTCGCGAGGCTACTTTAGCGGCCACGGCAACGGTGATTGGCGCATTGGCCTCCGCAATCGGTTTCCGCTTCTTCTACCGTTCTCAAACGCACGCCAAATCCTCTCTAAACGGCACCGTTTTCTCTCCCCGCGACCCTTTCGACCCCTCCAAGCGCAATGGATACTTATCGTGGGATGACTATTTTATGGCAATTGCGTTTTTGTCAGCTGAGAGGTCCAAAGACCCTAATAGGCAGGTTGGGGCTTGTTTGGTGAGTCAAGATGGTGTAATTCTTGGAATTGGTTATAATGGATTTCCAAGAGGTTGTTCTGATGACAAGCTACCCTGGGCAAAGAAATCCAGGACTGGGAATCCTTTGGAGACAAAGTACCCTTATGTTTGTCATGCAGAAGTAAATGCTATTCTCAACACTAATCATGCCTCTGCTGCTGGACAACGGCTATATGTGACCATGTTTCCGTGCAATGAATGTGCTAAGATCATAATCCAGTCAGGAGTTTCTGAAGTGATTTATTTTGTGGAGAAGAGACTAGAAAATTCAGATACTGCATATATTGCCTCTCACAAGCTACTTTCATTGGCTGGTGTAAAGGTCAGGAAACATCAACCACTGATGAATGAAATTCATCTGAAGTTTGAGGAGCACTAG 657 0.4536 MNSREATLAATATVIGALASAIGFRFFYRSQTHAKSSLNGTVFSPRDPFDPSKRNGYLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQDGVILGIGYNGFPRGCSDDKLPWAKKSRTGNPLETKYPYVCHAEVNAILNTNHASAAGQRLYVTMFPCNECAKIIIQSGVSEVIYFVEKRLENSDTAYIASHKLLSLAGVKVRKHQPLMNEIHLKFEEH 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00454 218 Gene3D Cytidine Deaminase, domain 2 51 218 - -
Gma05g00454 218 SUPERFAMILY Cytidine deaminase-like 61 207 IPR016193 GO:0003824
Gma05g00454 218 CDD deoxycytidylate_deaminase 61 174 IPR035105 -
Gma05g00454 218 PANTHER CYTIDINE/DEOXYCYTIDYLATE DEAMINASE FAMILY PROTEIN 1 218 - -
Gma05g00454 218 Pfam Cytidine and deoxycytidylate deaminase zinc-binding region 59 175 IPR002125 -
Gma05g00454 218 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 59 201 IPR002125 -
Gma05g00454 218 PANTHER DEOXYCYTIDYLATE DEAMINASE-RELATED 1 218 IPR015517 -
Gma05g00454 218 ProSitePatterns Cytidine and deoxycytidylate deaminases zinc-binding region signature. 131 164 IPR016192 GO:0008270|GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00454 Gma-Chr5 4320853 4323185 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00454 K01493 - gmx:100792003 442.965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00454 05 4320853 4323185 Gma05g00454 05 4320853 4323185 ECH
Gma17g01209 17 10631682 10633868 Gma05g00454 05 4320853 4323185 GST