Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01208 ATGGAGGTCGTACTCAAAGAGTTGCACGCCGATCTTCAATCTCTGAGCCAATCGCTTCCCGATCCATCTCACCATGATTTGCTCCGCAAGATTCAATTGCGTGTTGAGGACCTTGCGAAGCTTGCAGAGGCTGCACCTGTTCGTCGCTCTAAAGTTGAGGATATGAGTGCTGAGGTTGTAGATAGCAATCCTTATAGTCGGCTTATGGCACTTCAGAGAATGGGTATTGTGGACAACTATGAAAGAATACGCGATTTCTCCGTTGCCATAGTTGGAGTAGGTGGTGTAGGAAGTGTTTCGGCTGAGATGCTAACTAGATGTGGTATAGGTAGACTTTTGTTGTATGATTATGACAAAGTGGAGCTAGCAAACATGAATAGGTTGTTCTTTCGTCCAGATCAGGTTGGCATGACAAAGACTGATGCAGCTGTACAGACTCTGTCAGACATAAACCCTGATGTTGTACTTGAGAGCTATACACTGAATATCACCACCGTCACAGGTTTTGAAACCTTTATGTCGAGTTTGAAAAATAAGTCACTTCGCCCAAATAAACAAGGGAGTGGCGTGGATCTGGTTTTAAGTTGTGTGGATAATTATGAAGCAAGAATGGCTGTTAACCAGGCTTGTAATGAATTGAGCCAAACATGGATGGAATCAGGTGTTTCTGAGGATGCTGTTTCTGGCCATATTCAATTACTTATTCCTGGAGAAACTGCCTGTTTTGCGTGTGCACCTCCTCTTGTTGTTGCATCTGGGGTAGATGAACGTACGCTCAAGCGGGAAGGGGTTTGTGCTGCATCTTTACCCACCACTATGGGGGTTGTTGCTGGCCTTCTAGTCCAAAACACTCTAAAATTATTGCTAGGCTTTGGACAAGTCTCCCCGTATTTGGGATATAATTCTCTTAAGGATTTTTTCCCAACTATGCAAATGAAGCCAAACCCTCAATGTTCAAATGTAGCTTGTTTGGAAAGACAGGAAGAGTACATGCTTGCAAAACCAGCAAGAGATGCTGCAGCCAAAGCAAAAATGGAAGCTGAAGCACCATCAACTGAGGAAGTGCCACTTCATGAAGAAAATGAATGGAATATAAGTGTTGTTGATGATATTGAGCTGGATAGTCCGGATACCAGAAGTTCAGATGTTCTGCCGGAAGGTCTCACACATGAACTTCCTACTGCTGACGAGTTTCATAAGGCAACTCTTGACGCTCCATTAGTTGACAATGACGACCTTGAAGATCTTCGTAGGCAACTTGAAGCCATTAATTCTGCATAG 1281 0.4379 MEVVLKELHADLQSLSQSLPDPSHHDLLRKIQLRVEDLAKLAEAAPVRRSKVEDMSAEVVDSNPYSRLMALQRMGIVDNYERIRDFSVAIVGVGGVGSVSAEMLTRCGIGRLLLYDYDKVELANMNRLFFRPDQVGMTKTDAAVQTLSDINPDVVLESYTLNITTVTGFETFMSSLKNKSLRPNKQGSGVDLVLSCVDNYEARMAVNQACNELSQTWMESGVSEDAVSGHIQLLIPGETACFACAPPLVVASGVDERTLKREGVCAASLPTTMGVVAGLLVQNTLKLLLGFGQVSPYLGYNSLKDFFPTMQMKPNPQCSNVACLERQEEYMLAKPARDAAAKAKMEAEAPSTEEVPLHEENEWNISVVDDIELDSPDTRSSDVLPEGLTHELPTADEFHKATLDAPLVDNDDLEDLRRQLEAINSA 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01208 426 PANTHER BNAANNG16230D PROTEIN 1 426 - -
Gma17g01208 426 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 1 426 IPR045886 -
Gma17g01208 426 CDD ThiF_MoeB_HesA_family 64 312 - -
Gma17g01208 426 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 60 324 IPR035985 GO:0008641
Gma17g01208 426 Pfam ThiF family 65 319 IPR000594 -
Gma17g01208 426 Gene3D - 82 344 - -
Gma17g01208 426 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 88 116 IPR029752 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01208 Gma-Chr17 10623893 10629381 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01208 60 175 EF-hand Containing Proteins AT2G30110 32.773 8.29e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01208 K12164 - gmx:100819760 805.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01208 17 10623893 10629381 Gma17g01208 17 10623893 10629381 ECH
Gma17g01208 17 10623893 10629381 Gma05g00453 05 4306712 4311836 GST