Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00453 ATGGAGGTCGAACTCAAAGAGCTGTACGCCGATCTTCAATCTCTGAGCCAATCGCTTCCCGATCCATCTCACCATGATTTGCTCCGCAAGATTCAATTGCGTGTTGGGGACCTTGCGAAGCTTGCAGAGGCAGCACCTGTTCGACGCTCTAAAGTTGAGGATATGAGTGCTGAGGTTGTAGATAGCAATCCTTATAGTCGGCTTATGGCACTTCAGAGAATGGGTATTGTGGACAACTATGAAAGAATACGCGATTTCTCCGTTGCCATAGTTGGAGTAGGTGGTGTAGGAAGTGTTGCAGCTGAGATGCTAACTAGATGTGGTATAGGTAGACTTTTGTTGTATGATTATGACAAAGTGGAGCTAGCAAACATGAATAGGTTGTTCTTTCGTCCAGATCAGGTTGGTATGACAAAGACGGATGCAGCTGTACAGACTCTTTCAGACATAAACCCTGATGTTGCACTTGAGAGCTATACACTGAATATCACCACCGTCACTGGTTTTGAAACCTTTATGTCAAGTTTGAAAAATAAGTCATTTCGCCCAAATAAACAAGGGAGTGGTGTGGATCTGGTATTAAGTTGCGTGGATAATTATGAAGCAAGAATGGCTGTTAACCAGGCTTGTAATGAATTGAGCCAAACCTGGATGGAGTCAGGTGTTTCTGAGGATGCTGTTTCTGGCCATATTCAATTACTTATTCCTGGTGAAACTGCCTGTTTTGCGTGTGCACCTCCTCTGGTTGTTGCATCTGGGGTAGATGAACGCACGCTCAAGCGTGAAGGGGTTTGTGCTGCATCTTTACCCACCACTATGGGGGTTGTTGCTGGTCTTCTAGTCCAAAACACACTAAAATTATTGCTAGGCTTTGGACAAGTTTCTCCGTATTTGGGATATAATTCTCTTAAGGATTTTTTCCCAACTATGCAAATGAAGCCAAACCCTCAATGTTCAAATGTAGCTTGTTTGGAAAGACAGGAAGAGTACCTGCTTGCAAAACCAGCAAGGGATGCTGCAGCCAAAGCAAAAATGGAAGCTGAAGCACCATCAACTGAGGAAGTGCCACTTCACGAAGATAATGAATGGAATATAAGTGTTGTTGATGATGTTGAGCTGGTTGGTCCGGATACCAGAAGTTCAGATGTTCTGCCGGAAGGTCTCACACATGAACTTCCTACTGCTGACGAGTTTCATAAGGCAACTCTTGACGCTCCCGTAGTTGACAATGACGACCTGGAAGATCTTCGTAGGCAACTTGAAGCCATTAATTCTCCATAG 1281 0.4434 MEVELKELYADLQSLSQSLPDPSHHDLLRKIQLRVGDLAKLAEAAPVRRSKVEDMSAEVVDSNPYSRLMALQRMGIVDNYERIRDFSVAIVGVGGVGSVAAEMLTRCGIGRLLLYDYDKVELANMNRLFFRPDQVGMTKTDAAVQTLSDINPDVALESYTLNITTVTGFETFMSSLKNKSFRPNKQGSGVDLVLSCVDNYEARMAVNQACNELSQTWMESGVSEDAVSGHIQLLIPGETACFACAPPLVVASGVDERTLKREGVCAASLPTTMGVVAGLLVQNTLKLLLGFGQVSPYLGYNSLKDFFPTMQMKPNPQCSNVACLERQEEYLLAKPARDAAAKAKMEAEAPSTEEVPLHEDNEWNISVVDDVELVGPDTRSSDVLPEGLTHELPTADEFHKATLDAPVVDNDDLEDLRRQLEAINSP 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00453 426 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 1 425 IPR045886 -
Gma05g00453 426 CDD ThiF_MoeB_HesA_family 64 312 - -
Gma05g00453 426 Pfam ThiF family 65 319 IPR000594 -
Gma05g00453 426 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 88 116 IPR029752 -
Gma05g00453 426 Gene3D - 82 344 - -
Gma05g00453 426 PANTHER BNAANNG16230D PROTEIN 1 425 - -
Gma05g00453 426 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 60 324 IPR035985 GO:0008641
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00453 Gma-Chr5 4306712 4311836 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00453 52 247 EF-hand Containing Proteins AT2G30110 26.442 5.72e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00453 K12164 - gmx:100816132 803.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00453 05 4306712 4311836 Gma05g00453 05 4306712 4311836 ECH
Gma17g01208 17 10623893 10629381 Gma05g00453 05 4306712 4311836 GST